Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2980 ATGGGCTGTTGTGTATCTTCGTTTTCCAAGGATTCTAGTCCCCAAAACATCCCTTATTTGGATAATCACAAGAACAACATCCTCAATCTTCCTTCTTCCTCCAACGGCGCCGATAATACCGCTGCTGCTGCCGACTTCCCGCCGTTCTTGGAGTTCTCCCTCACCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGCGGTGAGAAAGCCCCCAATGTCGTCTACAAAGGTCGTCTCCACAATCAAAACCGCTGTTTTATTGCTGTCAAGAAATTCACTAAATTGGCGTGGCCCGACCCTAAACAGTTCGCGGATGAAGCTTTGGGTGTTGGAAAATTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTACTCGTTGCAGAGTACATGCCCAACGATACCCTTGCCAAACATCTATTTCACTGGGAGAATCAGACAATAGAGTGGGCCATGCGGTTAAGAGTTGCCTTAAACATTGCCGACGCATTAGATTATTGTCATAGAGAAGGCCATCCATTGTATCATGACTTGAATGCTTACAGAGTTCTCTTTGACGAGAATGGCGATCCCCGGCTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGCTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTAACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTTCTAAGTGGAAAGCATATCCCTCCAAGTCATGCTCTTGATATGATAAGGGGCAAGAATATACTTATCCTTATGGATTCACATTTGGAGGGAAACTTTTTAACTGATGAAGCAACTGTGGTTTTAGATCTAGCCTCTCATTGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACCAAGGACCTTGTTATCACACTTTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTCCCAAGCAAGAGGAAGCTCCTCCTACTCTGCAGCATCCTCTTTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGCGCACTACAGAGATGATGAAGTGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACATGGCTTTCCGTGACAAGGATTTTAAGACTGCGATGGAGTGTTACTCCCAGTTCATTGAGGTGGGAACAATGGTATCCCCAACAGTGTATGCTCGGAGGAGCCTTTGCCATCTGATGTGTGATCAACCAGATGCTGCTCTTAGAGATGCAATGCAAGCGCAGTGTGTGTATCCTGAGTGGTCTACGGCATTTTACATGCAGGCCGTTGCTCTTTCCAAGTTAAACATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTTCTGCCCTTGAAGAAAAAAGACGGGGCAAAGGCTCTTCCTCTTGA 1518 0.4592 MGCCVSSFSKDSSPQNIPYLDNHKNNILNLPSSSNGADNTAAAADFPPFLEFSLTDLKAATNNFSPDHIVSESGEKAPNVVYKGRLHNQNRCFIAVKKFTKLAWPDPKQFADEALGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIADALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILILMDSHLEGNFLTDEATVVLDLASHCLQYEPRERPKTKDLVITLSPLQNKPDVPSNVMLGIPKQEEAPPTLQHPLSPMGDACSRMDLTAIHQILLMAHYRDDEVTNELSFQEWTQQMRDMLEARKRGDMAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDAADMLNEASALEEKRRGKGSSS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2980 505 Gene3D Transferase(Phosphotransferase) domain 1 146 337 - -
Alju07g2980 505 Gene3D Phosphorylase Kinase; domain 1 39 144 - -
Alju07g2980 505 FunFam probable serine/threonine-protein kinase At4g35230 39 144 - -
Alju07g2980 505 Coils Coil 477 497 - -
Alju07g2980 505 SUPERFAMILY Protein kinase-like (PK-like) 47 328 IPR011009 -
Alju07g2980 505 ProSiteProfiles Protein kinase domain profile. 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2980 505 Pfam Protein kinase domain 80 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2980 505 Gene3D Tetratricopeptide repeat domain 394 501 IPR011990 GO:0005515
Alju07g2980 505 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 35 499 IPR045845 GO:0004672|GO:0009742
Alju07g2980 505 FunFam probable serine/threonine-protein kinase At4g35230 394 503 - -
Alju07g2980 505 SUPERFAMILY TPR-like 399 495 IPR011990 GO:0005515
Alju07g2980 505 FunFam probable serine/threonine-protein kinase At5g41260 146 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2980 Alju-ChrAlju07 54844229 54848715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2980 52 328 Glycoside Hydrolase AT3G07070 35.526 1.37e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Alju07g2980 Pkinase 6.7e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2980 07 54844229 54848715 Alju07g2980 07 54844229 54848715 ECH