Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2958 ATGGGACTTGGTTTCTTCAAGGCGCTTTGCTGCAGCAACTCTCAGCATGAAATTCCCATAGACTCATCGGACTCATCTCCGAGACGCACTAGCAGGAGGTACAGAGAAGAGCATGTATATAGAGGAACGGGTGGTTTGACGCAGGCACAAGTAGGGGCGGTGCTGGGGAAACCGTACGTGGACATAAGGAAGATGTACGAGCTGGAGAAAGAACTGGGGAGAGGGCAGTCTGGGGTGACATATCTGTGCACAGAGAAGATGACGGGGAGAAAGTACGCGTGCAAGAGCATAGCGAGGAGGAAGCTGAAGAGGAAGGAGGAAATAGAGGACGTGCAAAGGGAGATACTGTTGCTGCAGCATCTGTCGGGGCAGCCCAACATTGTGGAGTTCAGGGGGGCCTACGAGGACAGTCAGAACGTGTACCTGGTCATGGAACTCTGCACCGGAGGCGAGCTCTTCGACCGCATCATTGCCAAAGGCATGTATTCCGAGAAGGAGGCCGCCGCCTTGTTCCGCCAGATCGTCACCGTGGTTCACGTCTGCCACTTCATGGGAGTGATGCATCGGGACCTGAAGCCCGAGAATTTCTTGATGGCCAGCCCCGACAATGACGCCTCCATCAAAGCCACCGATTTCGGACTCTCCGTCTTCATTGAGCCCGGTAAAGAGTATAAGGAAGTTGTGGGGAGTGCGTACTATGTGGCCCCGGAGGTTCTAAAACGGAGTTATGGAAAGGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTGAGTGGTGTGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCTATTCTGGAAGGCAAACTTGATCTCGAAAGCCAACCATGGCCTTCTATTTCAGATTCTGCCAAGGATTTGATCAGGAAAATGTTGACATATGATCCCAAGAAACGCATCACAGCTGCTGATGCCCTTGAACATCCATGGATGAAGGTGGGCGGTCAAGCATCTGACAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTGAAGGTAATAGCAGAAAACCTCTCGGAGGAAGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGATACAGATAACAGTGGCACGATCACACTCGAAGAACTCAGAGCTGGATTGACCAAATTGGGATCCAAACTCAACGAATCTGAAATACGGCAGCTGATGGATGCTGCTGATGTTGACAAGAATGGAACTATCGATTACTATGAATTTATAACTGCCACCATGCATCGGCACAGACTTGAGAAGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGATTCATCACAAGAGAGGAGCTTAGGCAGGCTTTGACTGAATACGGAATGGGGGATGAAGCCACCATAGAGGAAGTGATTGACGATGTGGACACTGATAAGGACGGCAGAATAAATTACGAAGAGTTTGTGGCTATGATGAAGAACGCGGGATAA 1524 0.4882 MGLGFFKALCCSNSQHEIPIDSSDSSPRRTSRRYREEHVYRGTGGLTQAQVGAVLGKPYVDIRKMYELEKELGRGQSGVTYLCTEKMTGRKYACKSIARRKLKRKEEIEDVQREILLLQHLSGQPNIVEFRGAYEDSQNVYLVMELCTGGELFDRIIAKGMYSEKEAAALFRQIVTVVHVCHFMGVMHRDLKPENFLMASPDNDASIKATDFGLSVFIEPGKEYKEVVGSAYYVAPEVLKRSYGKEIDVWSAGVILYILLSGVPPFWAENEKGIFDAILEGKLDLESQPWPSISDSAKDLIRKMLTYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDNSGTITLEELRAGLTKLGSKLNESEIRQLMDAADVDKNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGFITREELRQALTEYGMGDEATIEEVIDDVDTDKDGRINYEEFVAMMKNAG 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2958 507 SUPERFAMILY EF-hand 363 503 IPR011992 -
Alju07g2958 507 CDD STKc_CAMK 66 323 - -
Alju07g2958 507 Gene3D Transferase(Phosphotransferase) domain 1 152 335 - -
Alju07g2958 507 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Alju07g2958 507 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2958 507 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Alju07g2958 507 FunFam Calcium-dependent protein kinase 1 68 151 - -
Alju07g2958 507 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Alju07g2958 507 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Alju07g2958 507 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Alju07g2958 507 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
Alju07g2958 507 Gene3D - 336 506 - -
Alju07g2958 507 FunFam calcium-dependent protein kinase 1 152 331 - -
Alju07g2958 507 FunFam Calcium-dependent protein kinase 1 332 507 - -
Alju07g2958 507 Pfam Protein kinase domain 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2958 507 Pfam EF-hand domain pair 441 504 IPR002048 GO:0005509
Alju07g2958 507 Pfam EF-hand domain pair 372 432 IPR002048 GO:0005509
Alju07g2958 507 ProSiteProfiles EF-hand calcium-binding domain profile. 475 507 IPR002048 GO:0005509
Alju07g2958 507 SMART serkin_6 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2958 507 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Alju07g2958 507 SMART efh_1 443 471 IPR002048 GO:0005509
Alju07g2958 507 SMART efh_1 478 506 IPR002048 GO:0005509
Alju07g2958 507 SMART efh_1 371 399 IPR002048 GO:0005509
Alju07g2958 507 SMART efh_1 407 435 IPR002048 GO:0005509
Alju07g2958 507 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Alju07g2958 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Alju07g2958 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 62 499 - -
Alju07g2958 507 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Alju07g2958 507 SUPERFAMILY Protein kinase-like (PK-like) 65 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2958 Alju-ChrAlju07 54598580 54603216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2958 47 506 EF-hand Containing Proteins AT3G20410 72.609 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju07g2958 Pkinase 1.2e-76 CL0016