Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2952 ATGGTCACTGATTCCTCTGATCATCACTCGCCTATTAGTGCTGGGGATACCGGTAGCCCTAATTTCCCGCGAAATACCCTGACATCTCCGTGGGCTCAAGTTGTACGAGGTGGGGAGTGCGAATCTCATCCATCGCCGCCTTCATCATCTTCCTCTTCGTCATCACTCACAACATCCGTGCCCGACCAACCGCCAATCTCTGATTTTCCACCGATGGAGGCACCTGCATCGCAGCTGCAGGATAACTCTAATGTTGTTGTTGCAGATAATTCTGACGCTGACGCTTCCGACGCCAATGCAGGTCGTTCTAGGAGGCCCGCTTGGAGCAAGCTTTCTAACGGCGTTGTTGAGGCTGGTCCAGTGATGGGCGCTGTTTCTTGGCCTGCATTATCTAAATCCACGAAGGTTTCGACCAAAATATCAGCTGACTCCACCTCTAAGACTCCCTTTGATGGATCACTCTCCACTTCTCAGGGATCTGGCACTCCACAATCACCTCAAAAACAACCTACTAATAATGCAAAGCCTAACTCTGCAACAAACTATGCTGTGCATCATAGACAAAGGTCAATGAAACGTGGAGCTAGCAACAGCATTGGGGTTGGTCATGCTCAGAGCAGCTTTTCTAACCCTCCGCCGCCTCCGCCCTTTCCTGTATTTCCTATACCGGCTAGTAGTTATGGTAATGTTATGCCAGGGGTTCCGGATCATTCTCCAAGGGAAATCCATTACAGGAACAATAACTGGGATACAAGACCACCGGTTGGGGGTTTTGTGCCTGCTGGGAATGATCATTGGAATTCCCCCCGCAGAGGCAATTTTGGGACCCATCAACGTGGGGATGGATCATATCATGGGGGTAGGCGTGACCAAGACCGTGGAAATCATGCAAACGCTAGAGATGCTCAAGTACACCAACAGAGGATGTCTCCTAGGGGATTAGTGAGGCACCCACCTCCTAATACTCCTGCATTTGTTGCCCCTCCGCCCATGGGACCCTTTGCAAACCCCATGGGTTTTCCAGAATTTCATTATTTCCCAACTCTACCACTAGAGCCATTCAGGGGTATGCCATTCATTACCCATGGTCCTCCTCCTGCAATGTTTCTCCCTGTTGCGGAACCTCCTCTGACAAATAAGATAGTAAACCAAATTGATTATTACTTTAGCGATGCAAATTTAGTCAACGATGAGTTTTTGATATCCAAAATGGATGAACAGGGTTGGGTTCCCATTGCTTTGATAGCAAACTTCCGTCGGGTTCAAAGTTTGACAAAGAACAAGAAGCTGATACTGGATTCATTGAGAAATTCTACAGTTGTGGAAGTACAGGGTGACAAGTTGCGGAGGCGTAATGAATGGATGAAGTGGCTTCCCTCATCTCTGCGTCGAGCTGATTCTGGTTCATCATCTCCTGTTGGACAAAGTTGCAGTAACCTAGTAGCTGATTTTCAAAAGATTGCTCTAGGTGAAATTGTTGCAGATGAAGGTAATTCAGACCCAACGTCAGAGGCCCTAGATGGAAGAAGATCTCCAATAGATTCTTCCAGTCAACCTCAATTTCCAAACGGTGATACTACAGGGAACGCCAATTAA 1596 0.4774 MVTDSSDHHSPISAGDTGSPNFPRNTLTSPWAQVVRGGECESHPSPPSSSSSSSSLTTSVPDQPPISDFPPMEAPASQLQDNSNVVVADNSDADASDANAGRSRRPAWSKLSNGVVEAGPVMGAVSWPALSKSTKVSTKISADSTSKTPFDGSLSTSQGSGTPQSPQKQPTNNAKPNSATNYAVHHRQRSMKRGASNSIGVGHAQSSFSNPPPPPPFPVFPIPASSYGNVMPGVPDHSPREIHYRNNNWDTRPPVGGFVPAGNDHWNSPRRGNFGTHQRGDGSYHGGRRDQDRGNHANARDAQVHQQRMSPRGLVRHPPPNTPAFVAPPPMGPFANPMGFPEFHYFPTLPLEPFRGMPFITHGPPPAMFLPVAEPPLTNKIVNQIDYYFSDANLVNDEFLISKMDEQGWVPIALIANFRRVQSLTKNKKLILDSLRNSTVVEVQGDKLRRRNEWMKWLPSSLRRADSGSSSPVGQSCSNLVADFQKIALGEIVADEGNSDPTSEALDGRRSPIDSSSQPQFPNGDTTGNAN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2952 531 MobiDBLite consensus disorder prediction 509 531 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 1 113 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 1 32 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 43 63 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 193 207 - -
Alju07g2952 531 SMART la 375 453 IPR006630 -
Alju07g2952 531 SUPERFAMILY "Winged helix" DNA-binding domain 368 459 IPR036390 -
Alju07g2952 531 ProSiteProfiles La-type HTH domain profile. 371 460 IPR006630 -
Alju07g2952 531 MobiDBLite consensus disorder prediction 282 299 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 125 215 - -
Alju07g2952 531 CDD LAM 379 451 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 493 531 - -
Alju07g2952 531 PANTHER LUPUS LA PROTEIN-RELATED 124 475 IPR045180 -
Alju07g2952 531 Pfam La domain 381 437 IPR006630 -
Alju07g2952 531 Gene3D - 371 460 IPR036388 -
Alju07g2952 531 MobiDBLite consensus disorder prediction 130 185 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 264 323 - -
Alju07g2952 531 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2952 Alju-ChrAlju07 54536353 54540688 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2952 07 54536353 54540688 Alju07g2952 07 54536353 54540688 ECH