Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2937 ATGGGCCGCCTTACATTATTGTTTTCATTTCTATTAACACTTCATATATCGGCGTCAGGAGTGATTTCAACTACATTCACAATGGTTAACAAATGCGAGTACACGGTGTGGCCGGGCATTTTATCGAACGCCGGAGTTACGCCTCTCCCGATAACCGGTTTCGTTCTGCAAACGGGTGAGTCCAAGACAATCTCTGCACCTACCGCTTGGGGAGGTCGCTTCTGGGGCCGAACTCTCTGCTCCCAAGACTCCAGCGGCAAGTTCTCCTGCGTCACAGGCGATTGCGGCTCGGGCACGCTGGAGTGCGCCGGCAACGGAGCCAGACCACCGGCCACGCTGGCAGAATTCACTTTGAACGGCGACGGTGGCATGGATTTCTTCGACGTCAGCTTGGTAGACGGTTACAACGTGCCTATGCTGGTCGTTCCTCAGGGGGGCTCGGGTGACAACTGCTCCAGCACGGGGTGCGTTGTGGATCTGAACGGCGCGTGTCCGTCAGAGCTCAAGGTTGTGAGCGTGGATGGGAAACAAGGGGTGGCGTGCAAGAGTGCCTGCGAGGCGTTCGGCTCCCCAGAGTACTGCTGCAGCGGTGCGTACGGGACGCCAGATACCTGCAAGCCCTCCTCCTACTCCATGCTGTTTAAAAGCGCCTGCCCACGCGCCTACAGCTACGCGTATGACGATAAGACGAGCACATTTACGTGTGCCTCCGCAGATTATACCGTAACATTTTGTCCGACGCCTAACACCAGTAAGAAAGCATCGGAAGGAGGGGAAGACGCGTCAGCATCATCAATGAGCAACAGCACCATTGTGTACGATGGAGCTGTTGGTCAGAGCGAGATATCAAAGGGTCCCCACCTGTTGAAATTGGGGCCCATTTCTAGCGTGGCAGTGACCGTTTGGCTTTTTTGCCTGCTCCTATGA 927 0.5556 MGRLTLLFSFLLTLHISASGVISTTFTMVNKCEYTVWPGILSNAGVTPLPITGFVLQTGESKTISAPTAWGGRFWGRTLCSQDSSGKFSCVTGDCGSGTLECAGNGARPPATLAEFTLNGDGGMDFFDVSLVDGYNVPMLVVPQGGSGDNCSSTGCVVDLNGACPSELKVVSVDGKQGVACKSACEAFGSPEYCCSGAYGTPDTCKPSSYSMLFKSACPRAYSYAYDDKTSTFTCASADYTVTFCPTPNTSKKASEGGEDASASSMSNSTIVYDGAVGQSEISKGPHLLKLGPISSVAVTVWLFCLLL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2937 308 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Alju07g2937 308 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Alju07g2937 308 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Alju07g2937 308 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Alju07g2937 308 SUPERFAMILY Osmotin, thaumatin-like protein 24 246 IPR037176 -
Alju07g2937 308 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Alju07g2937 308 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Alju07g2937 308 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Alju07g2937 308 Pfam Thaumatin family 30 246 IPR001938 -
Alju07g2937 308 PIRSF PR5 1 283 IPR001938 -
Alju07g2937 308 CDD TLP-PA 25 245 - -
Alju07g2937 308 PANTHER OS03G0233200 PROTEIN 7 246 IPR001938 -
Alju07g2937 308 Gene3D Thaumatin 24 246 IPR037176 -
Alju07g2937 308 SMART tha2 26 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2937 Alju-ChrAlju07 54433431 54434601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2937 4 264 Receptor kinase-like Gene Family AT5G38280 52.612 5.28e-96 295