Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2928 ATGGCTCTCCTTACTTTCTTGCCCGAACAGTCAGATTCGGACCCCAACTCTCAAGTTCCCACACGCAGGCGAAATAAGCCGCAGAAGAAGCAGAAGAAGAAACCACCGTCTTCATGGGACCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCCAGAGTTCACGATCCCTCCAAAAATCCCACCCCACTCGCCTACTCCAAGCTTGGATCTTCTTGCAGCTCCATCTGTAGCTTCAAAGACGTTGTCCACGGCAACACCCGTGTTGTTCACAGACCTGATAGCTCCTCGCCGGAGAGCAGTGCTCTGGGTCAGCAAACTGGTCTACTTAGCCGGAAGCCTCCCAATAACTCGTCATCCCGGTCGTCGGCCAAATCCAACGCCGCTCCAACCTGCACTACATCATCCAGAGGGATGCAATTCAGGAAACTCTCCGGCTGTTATGAGTGCCGCATGATTGTTGACCCTTCCAGGCTCCCTATTCCAAGAAGCACTCTGTGTTCTTGCCCTCACTGTGGAGAGGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAGGCGACTCGCCATGCCGTTTCAGAGCTGGGCCCGGAGGATTCGGGTCGAAATATTGTGGAGATAATATTCAAGTCAAGCTGGCTGAAGAAGGGCAGCTCCATCTGTAAGATCGAACGGATACTCAAAGTCCACAACACCCAGCGCACCATCCAACGGTTTGAGGAGTGCCGGGACGCAGTCAAGAGCCGTGCTCAGTACAGCGTCAAGAAGAACCCCAGGTGCGCTGCCGACGGCAACGAGCTCTTGCGATTCCACTGCACCAGCCTCTTTTGCTCCCTGGGTGCACGTGGCTCCTCCTCCTTGTGTGGGTCCCTCCCCGGCTGCGGTGTTTGCACCATCATCCGCCACGGATTCCAGGGCAAGTCTGATAGCGCCGGTGCCGCTGAACAAACACCATGCAAAGGAGTGCGGACCACGGCCAGCAGCGGTAGGGCCCACGACGCCCTGCAGTGTAACGACGCCAAGAGGGCGATGCTGGTGTGCCGTGTCATTGCTGGGAGGGTGAAGCGCGTGGTGGAGGAGGAGACTGTGGCGGCTGGGTCTTATGACTCGGTAGCGGGGTGCTCCGGGATCTACTCCAATCTCGAGGAGTTGGTGGTGTTCAATCCAAAGGCAATCCTGCCTTGTTTCGTTGTCATTTACAAAGTTGACGAAGGTCATCGTTATTGA 1233 0.5556 MALLTFLPEQSDSDPNSQVPTRRRNKPQKKQKKKPPSSWDQIKNLLTCKQIQGSRVHDPSKNPTPLAYSKLGSSCSSICSFKDVVHGNTRVVHRPDSSSPESSALGQQTGLLSRKPPNNSSSRSSAKSNAAPTCTTSSRGMQFRKLSGCYECRMIVDPSRLPIPRSTLCSCPHCGEVFPKMESLELHQATRHAVSELGPEDSGRNIVEIIFKSSWLKKGSSICKIERILKVHNTQRTIQRFEECRDAVKSRAQYSVKKNPRCAADGNELLRFHCTSLFCSLGARGSSSLCGSLPGCGVCTIIRHGFQGKSDSAGAAEQTPCKGVRTTASSGRAHDALQCNDAKRAMLVCRVIAGRVKRVVEEETVAAGSYDSVAGCSGIYSNLEELVVFNPKAILPCFVVIYKVDEGHRY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2928 410 FunFam C2H2-like zinc finger protein 193 403 - -
Alju07g2928 410 SUPERFAMILY ADP-ribosylation 194 403 - -
Alju07g2928 410 MobiDBLite consensus disorder prediction 92 137 - -
Alju07g2928 410 Gene3D - 185 406 - -
Alju07g2928 410 ProSitePatterns Zinc finger C2H2 type domain signature. 169 192 IPR013087 -
Alju07g2928 410 MobiDBLite consensus disorder prediction 91 137 - -
Alju07g2928 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 197 IPR013087 -
Alju07g2928 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 37 402 - -
Alju07g2928 410 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2928 Alju-ChrAlju07 54363755 54366377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2928 1 406 C2H2 Transcription Factor Family AT1G75710 62.661 1.92e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju07g2928 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2928 07 54363755 54366377 Alju07g2928 07 54363755 54366377 ECH