Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2917 ATGGCTTTCGTCGAAGATATGGTTAAAACCGGAGGATTAATTGTTGGGGCTCAATCTCTAGCTGCTGAGATGAAGATGTTGAAAGAAATGCAGGAGCAATCTGGGGTCCGAAAGAGTATAAATTCTGAGTTATGGCATGCTTGCGCTGGCCCACTTGTAAGCTTGCCTCAGGTGGGGAGTCTGGTGTATTACTTCCCTCAGGGACACAGTGAACAGGTGGCGGCTTCCACTAGAAGAACAGCAACTTCACAGATTCCAAACTATCCGAATCTTCAATCTCAGTTGCTTTGCCAAGTTCAAAATGTCGCACTTCATGCAGATAAAGACACGGACGAAATATACGCTCAAATGAGTCTCCAACCACTGAATTCTGAAAAAGATGTCTTCCCTATATCTGACTTTGGGACGAAGCCTAGTAAACATCCAAGTGAATTTTTCTGCAAAACTTTGACTGCTAGTGATACAAGCACGCATGGTGGCTTTTCTGTACCTCGCAGGGCTGCAGAAAAGCTCTTTCCTCCATTGGATTATACCATTCAGCCCCCGACACAAGAACTCGTTGTCCGAGACTTACATGATAATACTTGGACATTCCGACATATATACCGAGGCCAGCCGAAGAGACATCTTCTCACAACAGGATGGAGTTTGTTTGTTGGCTCAAAGAGGCTCAAAGCTGGTGATGCTGTTCTTTTTATCAGGGACGATAAATCACAATTGCTAGTTGGTGTTAGGCGTGCAAATCGTCAACAGACAACATTGCCGTCATCTGTCCTTTCTGCCGATAGCATGCATATTGGCGTGCTAGCTGCTGCAGCTCATGCTGCTGCCAATCAGAGCCCGTTTACTATTTTCTACAACCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTGGTTAAATACAGAAAAGCTGTATATGGTACCCAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGGTATATGGGCACTATAGTGGGTGTCAGTGACTTGGACCCTCTGAGGTGGCCTGGTTCAAAGTGGAGAAATATTCAGGTGGAGTGGGATGAGCCTGGGTGTGGCGATAAGCAGAATAGAGTTAGTGCTTGGGAAATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCGAGCCTGAAACGACCATTTCAATCTGGATCTTTTGGTACAGAAAATGAGTGGGGGACTTTGTTAAGAAGGCCTTTTATACAAGTTCCTGAAAATGCAAATTTGGAGCTCCCAAACTCTTTACAAAATCTATACATGGAACACCTGATGAAGGTTCTTTTTAAACCTCAACTGGCGAACAATCCTGGAGCGTTTTCACCAGTCATGCAGCAAGAATCTGCTCCCAAGGGTGATCTCTCACAAGATTTGAAGAAGACGCCAGCGACAGAGAGCCAAAAAGCTCATATTGTATGTTCAGGGAGCATACCTCCAAAAAATCCAGATAACTCTCAATCTCTCCCTGACCAATCTAATGCCTTCAACTTGCATTCCCTGTTGAAAAGTGATCAAACTGGGAAATTGCACCGTCAGCCTAAAATTGAGAATGCTCAATCTTCTGGAGCAGTTTCTGACAAGACAAAATTAGAATCGGTGGATTTAACTGACCATATTTTTGACTGTCCTTCAATAGAAGGATGCAACATGGAAAAAGTGGCGGCCAACCCTATGAACCCACCTGGCCATGTGAGTCAAATGGCGATGCTTAGTCAAAACCAGAGTCCATGGCCCGTGCAGCCTCAGTTAGAATCAACAATACCTCATTCTCAAATGGTTGATATTCCTCAATCTGATTACGCTCTTTTAAATGGCCTGCTTCCTCATGCAGACGTTGATGAATGGATGTTGTATTCTCCCTGCCAATCTTTTCCCGGAATGAGTAGATCAGCTGGGCCTTTGCAAGGACAGTCTTCACTTGTCCCACAAGCAGTTAATACTACCCCTTTACCTTCTGTGAGTCAAGAAATGTGGGATCATTATCTCAAAAATTTCAAGTCCTTACCTCAAGCAGACCAGTTAACACCCATCTCACAGCAAGGATTTCAGAACTTCAATTGTATGTCTAACCCAAATAACCTGAGGGATCTATCAGCTGAGAGCAATACCCAAAGCGGGGTGTATAGCAGTGTCAATGTGGATGCTAGCAACAGTGTAAGTACTATGGTTGATCCTTCTACTTCGAGTACCGTTTTGGATGACTTTTGCGTGTTGAAGGATGGGGAGTTCCAGAACCCATCAGAATGCATGGTTGGCAACGTAAGTTCGAGCCAGGACGTCCAGTCTCAGATTACCTCTGCAAGTCTAGCTGAGTCACACGTTTTCCCTCTGCAAGACATAACTGACAACTCTGGTGGTGGTACTTCTTCAAGCCACGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCATGGGCGCAAGTTGCTGCACCTGTGCGAACCTACACCAAGGTTCAAAAGGCAGGGTCAGTAGGAAGATCATTAGATGTAACCACTTTTAAGAACTACGAGGAACTGATCTGCGCAATTGAACGGATGTTTGGACTTGAGGGTCTGCTGAACGACACCAAAGGTTCAGGATGGAAATTGGTATATGTTGATTATGAAAACGATGTTCTGCTTGTTGGGGATGATCCTTGGGAGGAATTCGTGGGATGTGTACGGTGCATCAGGATATTATCTCCGGTGGAAGTGAAACAGATGAGCGAGGAGGGAATGAAGCTTCTAAACAGTGCTGCGGTGCAACAGTTGAATGGAACCATGTCAGGTGGCTGCCCTTAG 2823 0.4485 MAFVEDMVKTGGLIVGAQSLAAEMKMLKEMQEQSGVRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLQSQLLCQVQNVALHADKDTDEIYAQMSLQPLNSEKDVFPISDFGTKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDAVLFIRDDKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANQSPFTIFYNPRACPSEFVIPLVKYRKAVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGVSDLDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSAWEIETPESLFIFPSLTSSLKRPFQSGSFGTENEWGTLLRRPFIQVPENANLELPNSLQNLYMEHLMKVLFKPQLANNPGAFSPVMQQESAPKGDLSQDLKKTPATESQKAHIVCSGSIPPKNPDNSQSLPDQSNAFNLHSLLKSDQTGKLHRQPKIENAQSSGAVSDKTKLESVDLTDHIFDCPSIEGCNMEKVAANPMNPPGHVSQMAMLSQNQSPWPVQPQLESTIPHSQMVDIPQSDYALLNGLLPHADVDEWMLYSPCQSFPGMSRSAGPLQGQSSLVPQAVNTTPLPSVSQEMWDHYLKNFKSLPQADQLTPISQQGFQNFNCMSNPNNLRDLSAESNTQSGVYSSVNVDASNSVSTMVDPSTSSTVLDDFCVLKDGEFQNPSECMVGNVSSSQDVQSQITSASLAESHVFPLQDITDNSGGGTSSSHVDFDESSFLQNNSWAQVAAPVRTYTKVQKAGSVGRSLDVTTFKNYEELICAIERMFGLEGLLNDTKGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPVEVKQMSEEGMKLLNSAAVQQLNGTMSGGCP 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2917 940 Gene3D - 144 247 IPR015300 -
Alju07g2917 940 CDD B3_DNA 145 246 IPR003340 GO:0003677
Alju07g2917 940 FunFam Auxin response factor 144 248 - -
Alju07g2917 940 Pfam AUX/IAA family 824 912 IPR033389 -
Alju07g2917 940 Gene3D - 823 916 - -
Alju07g2917 940 MobiDBLite consensus disorder prediction 452 478 - -
Alju07g2917 940 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 917 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju07g2917 940 SUPERFAMILY DNA-binding pseudobarrel domain 134 275 IPR015300 -
Alju07g2917 940 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju07g2917 940 Pfam B3 DNA binding domain 146 247 IPR003340 GO:0003677
Alju07g2917 940 SMART B3_2 146 248 IPR003340 GO:0003677
Alju07g2917 940 SUPERFAMILY CAD & PB1 domains 830 906 - -
Alju07g2917 940 FunFam Auxin response factor 823 916 - -
Alju07g2917 940 ProSiteProfiles PB1 domain profile. 827 911 IPR000270 GO:0005515
Alju07g2917 940 Gene3D - 310 382 - -
Alju07g2917 940 FunFam Auxin response factor 310 382 - -
Alju07g2917 940 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2917 Alju-ChrAlju07 54270831 54275864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2917 19 936 B3 DNA Binding Superfamily AT1G19850 59.509 0.0 995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Alju07g2917 AUX_IAA 7.4e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2917 07 54270831 54275864 Alju07g2917 07 54270831 54275864 ECH