LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2916	ATGACGCATTCTACGTTCCGCGGCCAGTGTTTGCCTTTTGAAAGTAAAGGCATACTTGTAGTTCTTCTTGCGATAGGGACGGAAAAGATTGTGTGCTTTTACTTGGCTTATATGTTGTTATTGAGTCTGAAGGGTGGTCTTGGCGTAACTGCAGCATTTAACTCCGGAAGGAGCCGATCTGCTTCAACTCCAAATCTCGGTCTCCCTGTCTTCTCCTTCTCCGGCCTCTGTGTGAGTGGAAACAAGACTCATCCCGATATGGGTTCTGTTTCTCTTAAAATAGGGGATGGCACTGCCAGATTTAAACGAGCAACTTTTTGTTCTTCGGCAGTCAACATTATCATGATCTTCTGTGTTATCACTACCAATCTTTTTGCCCTATATGCTTTCACTGCTTCCCCAAAACACCATAATAACCACCTGCTTCTTCATGCTCAAAAGAACTTCTCTCTCATTTCTGAGCAGGTCTCTCTGATACTGAGAGAGATCGATTCGTCTCAGAAAAAATTGGTCCAGATGGAGAAGGAGCTTCTTGGCTATGAAAATGTTGACCTTTCCAGACCTAATATAGCTAGCGAACTTAAGCTCTATCTCCAGCACCACCAGCTTCCTCTTGGCAAAGATTCCAGAACTGGGATCACTGAAATGGTCGCCTCTGTTGGTCATTCTTGTGAGAAATCAGCGGATTTATTGTCTGAATACATGAATTACAAGATTGCTGGACCTTGCCCCGATGATTGGAGTTCGGCGCAGAAACTGATCTTGCGCGGATGTGAGCCTTTACCAAGGAGGAGGTGCTTTGCTAAATCTGTTTCTCAGGTAGGTCTTTATCCTTTTCCCATTTCCCTTTGGAAACCTGTGGGTAATAAGACTGTTAACTGGAGTGGACTGGGTTGTAAGAATTTTGAATGTTTGAATGGTAAGAAATTGGGTAGAGATTGCATTGGTTGCTTTGATTTAGTTAATGGCTACGAGAATCAGAGATATGTGAAGGCTAGAGGTAAGAATGATTTTGTCATTGACGATGTGTTAGCATTGGCAAGTGGAGGAATTAGAATAGGGTTTGACATTGGAGGTGGGTCCGGATCCTTTGCGGCCAGAATGGCCGAGAGGAACGTCACCGTGATCACCAACATTCTGAACATAGATGCGCCATTCAGCGAATTCATTGCTGCAAGAGGGCTTTTTCCTCTGTTCTTAAGCTTAGATCATAGGTTCCCTTTCTATGATAATGTGTTTGATTTGGTTCATGCGTCCAGTACCCTGGATGTTGGAGGGAAGCCTGAAAAACTGGAGTTTTTAATGTTTGACATTGATCGGATTTTGCGTGCGGGTGGGTTGTTTTGGCTGGATAACTTCTACTGTGCCAATGATGAGAAGAAGAAGGCCTTGACTCGTTTGATCGAACGTTTTGGATATAAGAAGTTAAAATGGGTTGCGGGAGAGAAGGTTGATAGTGTGGGATCCGGAAAATCTGAAGTTTTATCTGCAGTGCTTCAGAAGCCTGCAAGAGTGTAA	1518	0.4381	MTHSTFRGQCLPFESKGILVVLLAIGTEKIVCFYLAYMLLLSLKGGLGVTAAFNSGRSRSASTPNLGLPVFSFSGLCVSGNKTHPDMGSVSLKIGDGTARFKRATFCSSAVNIIMIFCVITTNLFALYAFTASPKHHNNHLLLHAQKNFSLISEQVSLILREIDSSQKKLVQMEKELLGYENVDLSRPNIASELKLYLQHHQLPLGKDSRTGITEMVASVGHSCEKSADLLSEYMNYKIAGPCPDDWSSAQKLILRGCEPLPRRRCFAKSVSQVGLYPFPISLWKPVGNKTVNWSGLGCKNFECLNGKKLGRDCIGCFDLVNGYENQRYVKARGKNDFVIDDVLALASGGIRIGFDIGGGSGSFAARMAERNVTVITNILNIDAPFSEFIAARGLFPLFLSLDHRFPFYDNVFDLVHASSTLDVGGKPEKLEFLMFDIDRILRAGGLFWLDNFYCANDEKKKALTRLIERFGYKKLKWVAGEKVDSVGSGKSEVLSAVLQKPARV	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2916	505	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	348	450	IPR004159	GO:0008168
	Alju07g2916	505	PANTHER	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED	110	504	-	-
	Alju07g2916	505	Coils	Coil	156	183	-	-
	Alju07g2916	505	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	336	468	IPR029063	-
	Alju07g2916	505	Gene3D	Vaccinia Virus protein VP39	324	493	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g2916	Alju-ChrAlju07	54265374	54269345	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju07g2916	07	54265374	54269345	Alju07g2916	07	54265374	54269345	ECH