Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2915 ATGCTAAATATGCGTTGTTTACTCAAATCGAAAAGAGTTTCTTGGGCCTCAGATTTAGATCTTTGTCAGGTTAGATTATTTTTATCAGAGGAATGTCCTTCGCAAGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGACATCATTACTGTCGCATCCAGGAGGAGCAGGTTCTGATGACATTCTACCTCCTGGCTTTGAGGGAACTCAATCCTCAAGTCAGACGCAGATTAAGCTCTCCCAAATTCCAGTGATTAAATGGACCAATCCACTTAAGATTGTGCTTAATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAAAATCAGAGAGAGATGAAAGTACTTGAAGCTATTTATCCCCGCCCATCTTCGATACCTCCAAACCCCTCCGTCTCAATGGATGTAGAAGACTCCCTTTGCAATGATGATCATACAGCTTTGATACCAATTACACCAATTGAAGATGAGGATCCCACAGTAGACGCATCATCTGGAGTGCCACCTAGTTCACAGCATCTTTTATTTGTTGCTGGAGTACACGGGGGTTCTAACTCTTCTCAAATTACGCAATTACCCCATGTTGTAGAATCTGAGGCTGCTGAAGCATCTTTAGCTTTAAACCATATCATGAAGAACAGCGAGCATGGAATTTTGATTGACCATGAATTACTGAATAAAATTCTCAGCAACCCGGAAGTGATTGAAAAGTTGGTTAGAGAACATGGAAATACAAATAACTCACAACATACATTCAGCGCTAGCTCATCCTTGGTCACTTCACGACCCCCCATTACTCTGAATCAAGCTGAAACCAGTACACCTTCATTTGGTACCTTTTCAGCTAGCCCTTCCTATCCTGCTCAGATGGGTGGTGGAGTGGGACCTGTTCCTCCTCAACGGGTCCCTCTGCCTGTAGGTAGTCTTGGAGCTCCTCCAGCAAAGGATGTGAACTACTATAAGAGCTTAATTCAGCAACACGGTGGAGAAAAACAAGAGGCTCTTCCTTATATGAACAACATTAAGCAACCCGTAGGAAACCAGGAGACAACACACAATTCTAGATTAAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTTCAAAAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGTGGCATTTCAGCCTCGTGGTAGTGCTGTGCCAGGCGTACAAAATTCAAAGAGAACCAAAATGGATAGCGAGATTAGCAGGAGGGACGCCGTAAAAATGTTGAAGTTCCTATCAAGGGTGCGAATCGAGTTCAATGCCTTGGACCCGCGGACTGCGTCCTGTATGGAGTTCTTGGCACAGTGTAACGCTCGGAAGGCGAAGGAATCAAACCCTGGGTGCCAAGTGGTGGTGAAGCGCCGAACTGATGACCACCCACCGCAGATTACTGTCACTTTCGTCAACGGGGTTGAAGAAGTGTTCGATGCAACATCCACCCCTGCACAGACCATTAGGAATATGATTCTCGAAAAAGGTCAGCACTTGGAGACCGAACAAATGTTCCGAGAGGCAGGGGAGGCGTGGCCTGTAATTATCCCCGAGGAAGAGCTCCGCCAACCTGCACCTGGTGTCAAACCGAGGAAAGCAGAAGAGAAAAGGCAGTAG 1662 0.4573 MLNMRCLLKSKRVSWASDLDLCQVRLFLSEECPSQVGLNAQDHLQAKTSLLSHPGGAGSDDILPPGFEGTQSSSQTQIKLSQIPVIKWTNPLKIVLNLTWQVVAGEESKEVEDQNQREMKVLEAIYPRPSSIPPNPSVSMDVEDSLCNDDHTALIPITPIEDEDPTVDASSGVPPSSQHLLFVAGVHGGSNSSQITQLPHVVESEAAEASLALNHIMKNSEHGILIDHELLNKILSNPEVIEKLVREHGNTNNSQHTFSASSSLVTSRPPITLNQAETSTPSFGTFSASPSYPAQMGGGVGPVPPQRVPLPVGSLGAPPAKDVNYYKSLIQQHGGEKQEALPYMNNIKQPVGNQETTHNSRLREPKPKIMKPCIYFNSSKGCRNGANCAYQHDVAFQPRGSAVPGVQNSKRTKMDSEISRRDAVKMLKFLSRVRIEFNALDPRTASCMEFLAQCNARKAKESNPGCQVVVKRRTDDHPPQITVTFVNGVEEVFDATSTPAQTIRNMILEKGQHLETEQMFREAGEAWPVIIPEEELRQPAPGVKPRKAEEKRQ 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2915 553 ProSiteProfiles Zinc finger C3H1-type profile. 367 395 IPR000571 GO:0046872
Alju07g2915 553 MobiDBLite consensus disorder prediction 532 553 - -
Alju07g2915 553 MobiDBLite consensus disorder prediction 55 74 - -
Alju07g2915 553 Pfam 39S ribosomal protein L53/MRP-L53 437 488 IPR019716 -
Alju07g2915 553 Gene3D Glutaredoxin 423 525 - -
Alju07g2915 553 MobiDBLite consensus disorder prediction 539 553 - -
Alju07g2915 553 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 276 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2915 Alju-ChrAlju07 54255578 54265105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju07g2915 MRP_L53 4.3e-14 No_clan