Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2901 ATGAAGATCCTGTGCGACGTCTGTAATAACCACGACGCTTCCCTATTCTGCACCGCCGACGAAGCCGCCCTATGCGATGCCTGCGACCACCGGGTCCACCATGCCAACAAGCTCGCCTCCAAGCACCACCGCTTCTCTCTTCACCGCCCTTCTCCCAACCAATTCCCTCTGTGTGATATTTGCCTGGAGAGAAGAGCGTTTGTGTTCTGTCAACAGGACAGGGCAATTCTATGCAAAGATTGTGACACGCCGATTCACTCGGCCAACGAGCACACCCGGAAGCACAATAGGTTTCTTCTAACGGGGATCAAGCTCTCTGATGCTGCCACGCCTTATTCACCATCAACCTCCAACCCCGTTTTGACGAATGATTCTGATTCCGTGTTGCAGAATTCAGCTAAGAACTCTGTTTCCGCTTCTTCTGCCATCTCACACCCCCCTTCAGTGGACAAGACTTCAGCTTCAACAGCATCAACACATGCCACAATTAACAAGGCTGTGGGAAACTTGTCCACGATCGAAGGGACTGTTTCCACAAGTAGTATATCTGAGTATTTGATAGAGACTCTCCCGGGCTGGCAGGTCGACGAATTTCTCGACTCTTCTGCTGTTCCGTTTGGTTTCAGTAATAAGAGTGATGATATGTTGGCTGTGTTCGATGCTGATATTGAGGGAAATATGGGTTCTTTCTCTACGGAGAGTATGGGGATCTGGGTTCCTCAGGCACCCACTCCTCTGTTTACCCAACAAGTGGATCGGCAGATCAAGTTCCAAGAGACAAAAGGGACGACCAATACTGAGGCCAGCAGATCAAGGTCGAGGGATGATAACTTCATAGTTCCACAAATCAACCCTCCTATTGGGTCTAAGAGATCCAGACTTCTTTGGTAG 891 0.4972 MKILCDVCNNHDASLFCTADEAALCDACDHRVHHANKLASKHHRFSLHRPSPNQFPLCDICLERRAFVFCQQDRAILCKDCDTPIHSANEHTRKHNRFLLTGIKLSDAATPYSPSTSNPVLTNDSDSVLQNSAKNSVSASSAISHPPSVDKTSASTASTHATINKAVGNLSTIEGTVSTSSISEYLIETLPGWQVDEFLDSSAVPFGFSNKSDDMLAVFDADIEGNMGSFSTESMGIWVPQAPTPLFTQQVDRQIKFQETKGTTNTEASRSRSRDDNFIVPQINPPIGSKRSRLLW 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2901 296 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju07g2901 296 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 286 - -
Alju07g2901 296 MobiDBLite consensus disorder prediction 136 156 - -
Alju07g2901 296 SMART bboxneu5 4 47 IPR000315 GO:0008270
Alju07g2901 296 SMART bboxneu5 53 100 IPR000315 GO:0008270
Alju07g2901 296 CDD Bbox1_BBX-like 57 100 - -
Alju07g2901 296 FunFam B-box zinc finger protein 21 1 98 - -
Alju07g2901 296 Gene3D Classic Zinc Finger 1 100 - -
Alju07g2901 296 MobiDBLite consensus disorder prediction 259 285 - -
Alju07g2901 296 CDD Bbox1_BBX-like 4 47 - -
Alju07g2901 296 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Alju07g2901 296 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Alju07g2901 296 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2901 Alju-ChrAlju07 54115486 54116619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2901 1 296 C2C2-CO-like Transcription Factor Family AT1G75540 43.109 2.95e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Alju07g2901 zf-B_box 7.9e-06 No_clan