Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2888 ATGGCTGCTCTAATTTCTCCACCATTTTCAGCTTCATTTTCTATCGTTCGCTTCCGTGAAACTTCCTTGTTTTCCACTCGCCTGCTTCCTTCAAGGAATCTTCAACAGAGATGCAATTCTGATAATTATCGATGGTGCGGGGTTAATTGCAGACTCCTCAGCGTCAGTGTGGCTCCTTCATCAAGTCCTCCGACAGTGATCAAGGAACCTCACAAGTATTTTGATCATGCTATCATCACAGTTCGTTCGGGTGATGGAGGCCATGGAGCTATACTTAGCATGCCCGGCCAGAGAATTAATAGTTCACAAGGAAGACCTGAAAAGCAAAAGACAAGGAAAAAAAACTCCTATAGAAGAGACTTTGATGGGTCGCTTATCCTACCTATGGGTGGGCATGGAGGGGATGTGGTGATTTATGCGGACGAGGAAAAAGATTCATTATTGGAATTCCACAGCAAAAGTCGTTATAATGCAAAGCGCGGTGGCAATGTTGATACAATGGGTATTTTGACCTCACAATTGCATGATGGACTTGCTGCTCCAACTCTGCGCATTCCTGTGCCTGTAGGTACTGTTGTGAAACGCAGGAGAGGGAAATTGCTGGCTGATCTGGCACAACCAGGTGATGAAGTTCTTGTTGCAAGGGGTGGACAAGGAGGGATTAGCTTGTTAGATCTGCCACAGCATAAAAGGAAGGAGATGATGGCATTGACAACAAATGTGTTGAGAGATGACACTGACAAGGTTTTAGTTCATGGTCAACCAGGTGAGGAAGTTAGCTTAGAGTTGATCCTACGAGTTGTGGCTGATGTTGGTCTAGTTGGACTTCCAAATGCTGGGAAATCAACACTACTGGCAGCCATTACACTAGCAAAACCTGATATTGCTGATTATCCTTTTACAACATTAATGCCGAACCTTGGACGACTAGGTGGTGACCCCAGCTTGGGAGCAGGAATGTTTTCATCTGAAGCTACATTAGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGAAATTTCTTGAGGCACCTCAGGAGGACCCGGCTTCTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCATCAATGATTATAGAACTGTCAGGGAAGAGTTGTGCATGTATAACCCTGAATACCTTGACCGACCATACATTGTGATTTTAAACAAGATTGACCTTCCAGAAGCAAAGGACAGGCTTCCATCATTGACTGAAAAAATACTGAGAATTGGGAGCGTTGGTACACCTTCTGAAGTAAAGCTAACCTCTGAAGTTCCAGATCAACCATTATCCAGTGAAGTTGTCATCAAGGAAAAGAAACTGGAGGATTATCCCCCACCCCTGTCCGTTGTGGGTGTTAGTGTTCTGAAGGGCATCAGGATAGATGACATGCTAAAGGAGATAAGGAAAGCTTTAAGGAAGTGTATGGATCCCACTGAAGCATCTTCGGCTTTCAATTCACCCTCAGAAACTGGCAAGTGA 1503 0.4491 MAALISPPFSASFSIVRFRETSLFSTRLLPSRNLQQRCNSDNYRWCGVNCRLLSVSVAPSSSPPTVIKEPHKYFDHAIITVRSGDGGHGAILSMPGQRINSSQGRPEKQKTRKKNSYRRDFDGSLILPMGGHGGDVVIYADEEKDSLLEFHSKSRYNAKRGGNVDTMGILTSQLHDGLAAPTLRIPVPVGTVVKRRRGKLLADLAQPGDEVLVARGGQGGISLLDLPQHKRKEMMALTTNVLRDDTDKVLVHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELCMYNPEYLDRPYIVILNKIDLPEAKDRLPSLTEKILRIGSVGTPSEVKLTSEVPDQPLSSEVVIKEKKLEDYPPPLSVVGVSVLKGIRIDDMLKEIRKALRKCMDPTEASSAFNSPSETGK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2888 500 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 269 480 IPR031167 GO:0005525
Alju07g2888 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 485 IPR027417 -
Alju07g2888 500 PRINTS GTP1/OBG GTP-binding protein family signature 292 310 IPR006073 GO:0005525
Alju07g2888 500 PRINTS GTP1/OBG GTP-binding protein family signature 327 342 IPR006073 GO:0005525
Alju07g2888 500 PRINTS GTP1/OBG GTP-binding protein family signature 271 291 IPR006073 GO:0005525
Alju07g2888 500 PRINTS GTP1/OBG GTP-binding protein family signature 344 362 IPR006073 GO:0005525
Alju07g2888 500 Pfam 50S ribosome-binding GTPase 270 397 IPR006073 GO:0005525
Alju07g2888 500 ProSitePatterns GTP1/OBG family signature. 329 342 IPR006074 GO:0005525
Alju07g2888 500 MobiDBLite consensus disorder prediction 90 116 - -
Alju07g2888 500 Pfam GTP1/OBG 130 266 IPR006169 -
Alju07g2888 500 CDD Obg 269 414 IPR031167 GO:0005525
Alju07g2888 500 Gene3D GTP1/OBG domain 72 267 IPR036726 -
Alju07g2888 500 SUPERFAMILY Obg GTP-binding protein N-terminal domain 73 234 IPR036726 -
Alju07g2888 500 ProSiteProfiles Obg domain profile. 71 268 IPR006169 -
Alju07g2888 500 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 69 477 IPR045086 GO:0003924|GO:0005525
Alju07g2888 500 Gene3D - 268 487 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2888 Alju-ChrAlju07 53963988 53968247 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2888 07 53963988 53968247 Alju07g2888 07 53963988 53968247 ECH