Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2855 ATGGAAAGTAGTTTAGAAAGTAACTTGCTATTTATCCTTATTGGCAATTGGAAGCGACCTCTTTGTCCCCAACTCCCCTGCTTACTACTTCACTCACCCAGCTGCCAGCTTGCGGCGTGCCGGCGTCCGTGTGTGACCTCAACCTCGTCTCGCGGTGGCCCCGCCTCCTTTCAGCGTTTTTTGGTTTTCCGATTTTACGCTGAGATTGTTCGAATTAGCAAATCTCTGCGTTCTCCCGTACCGGGATCAGACCAAACCCAACAAATCGGAATCTTCTCCAGTCCTCCATCACGTTACCTCTTCCCCGCCTTCTTTTCGTCCGCCGTCTCTCTGCAAAAATTTTCTTTAGTCTGTCTCCTCAGGGAATTGATTCGAGCATCACCGTTGGAGGTTGGAGCAACGCTGTGGCGGGAAGAGGATATCGATTTTAGCCGTCGGTGCCTCGTGCCGCCATTAGTTCAGTTTGCTGCCAAGATGGCTGAGGTGCTAGATAATGACACTCTTGCAAGGGACAAGCCTTCCACGGAACAGGATATTCCTGACGAGTTAGATCTGAAAATAAAGAAGTACCTGAGAGGAGAAGGTGCGAATTTGGAGGTTTTGACAGACAAAAAACTGAAGGGTCAACTTTCTGTGAGAGAAGAGTTATATAGTAAATCTGCTAAAGTAGCTGCCAAGGCGGATAAGTGGCTGGTGCCCAGTGAGGGAGGTTATCTAGAGGCTGAAGGCATAGAGAAGACATGGAGGATCAAACAAGAGGCAATAGCTAAAGAAGTAGATATCTTAAGCTCAAGAAACCAATATGATATTGTTTTACCAGAACTTGGTCCGTACAATTTGCAATTTACTTCAAGCGGACGTTATATGGCTCTTGGAGGGCGTAAGGGCCATTTGGGAATTGTGGACTTGATGAATATGAGCCTAATCAAAGAGTTTCAGGTTAGAGAAACAGTCCGTGATGTGACATTCTTGCATAATGAGCTGTTTTTTGCTGCTGCGCAGAAAAAGTATACTTACATCTATGACCGTCATGGCACTGAGCTTCACTGCCTTAAGGAACATGGTCCTGTGTTAAGGCTTCAGTTTCTAAAAAATCACTTCCTTCTGGCTTCAATAAACAAGTTCGGGCAGCTTCATTATCAGGATGTTACGACAGGTGCAATGGTTGGTAATTTTCGAACTGGTTTAGGTCGTACTGATGTGATGCAAGTGAACCCATTCAATGGGGTTGTTGCTTTGGGTCATTCAGGTGGTACGGTCGCAATGTGGAAGCCTACTAGCTCAGCTCCTCTTGTCAAGATGTTGTGTCATCATGGTCCTGTCTCAGCTCTGGCATTTCACTCAAATGGCCACTTAATGGCCACAGCTGGAAAAGACAAAAAAATAAAGCTTTGGGACTTGAGAAAATATGAGGTTTTCCAGACACTACATGGCCATGCCAACACGTTGGATTTTAGTCAAAAAGGACTACTTGCTTGTGGTACTGGATCTTCTATACAGGTTCTGGGTGACCTTTCTGGCTTGCAGAATTATTCGAGATATATGACTCATTCCATGGTTAAAGGTTACCAAATATCAAAGTTAATGTTTCGACCATATGAAGATGTTCTGGGCATAGGGCATTCCATGGGTTGGTCCAGCATTCTTATTCCAGGATCGGGAGAACCTAACTTTGATACATGGGTGGCTAATCCATTTGAAACATCTAAACAGAGGAGAGAGAAAGAAGTTCGCTCACTGCTGGATAAGCTGCCGCCTGAGACAATCATGTTGGACCCAAGCAAAATCGGTACAGTACAGCCTGCACAGAAAGAGAAGAAGCCGAAGGAGAGGGAGGCAGATATAGAAGCTGCCGCTGAAGCTGCCAAGGACCTCAAAATGAAGAAAAAAACTAAAGGAAGAAGTAAACCAAGCAAGAAGGTGAAGAAAAAGAAGGAAGCAATTGAGAAAGTGAAGAGGCCTTTCTTGGAAGAAAAAATGAAGGAGGAAGCAATTTCGAGGAAGAAACAAAAAATCAGCGAGGAAGTCAGTTTACCAAAATCTTTAAAGAGGTTTGCTGGTAAAAAGCCAGCAACATGA 2079 0.4468 MESSLESNLLFILIGNWKRPLCPQLPCLLLHSPSCQLAACRRPCVTSTSSRGGPASFQRFLVFRFYAEIVRISKSLRSPVPGSDQTQQIGIFSSPPSRYLFPAFFSSAVSLQKFSLVCLLRELIRASPLEVGATLWREEDIDFSRRCLVPPLVQFAAKMAEVLDNDTLARDKPSTEQDIPDELDLKIKKYLRGEGANLEVLTDKKLKGQLSVREELYSKSAKVAAKADKWLVPSEGGYLEAEGIEKTWRIKQEAIAKEVDILSSRNQYDIVLPELGPYNLQFTSSGRYMALGGRKGHLGIVDLMNMSLIKEFQVRETVRDVTFLHNELFFAAAQKKYTYIYDRHGTELHCLKEHGPVLRLQFLKNHFLLASINKFGQLHYQDVTTGAMVGNFRTGLGRTDVMQVNPFNGVVALGHSGGTVAMWKPTSSAPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKIKLWDLRKYEVFQTLHGHANTLDFSQKGLLACGTGSSIQVLGDLSGLQNYSRYMTHSMVKGYQISKLMFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVRSLLDKLPPETIMLDPSKIGTVQPAQKEKKPKEREADIEAAAEAAKDLKMKKKTKGRSKPSKKVKKKKEAIEKVKRPFLEEKMKEEAISRKKQKISEEVSLPKSLKRFAGKKPAT 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2855 692 ProSitePatterns Trp-Asp (WD) repeats signature. 453 467 IPR019775 -
Alju07g2855 692 ProSiteProfiles Trp-Asp (WD) repeats profile. 434 475 IPR001680 GO:0005515
Alju07g2855 692 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 434 468 - -
Alju07g2855 692 MobiDBLite consensus disorder prediction 642 682 - -
Alju07g2855 692 SMART WD40_4 385 424 IPR001680 GO:0005515
Alju07g2855 692 SMART WD40_4 427 466 IPR001680 GO:0005515
Alju07g2855 692 SMART WD40_4 469 503 IPR001680 GO:0005515
Alju07g2855 692 SMART WD40_4 305 342 IPR001680 GO:0005515
Alju07g2855 692 Gene3D - 260 396 IPR015943 GO:0005515
Alju07g2855 692 Pfam BING4CT (NUC141) domain 514 592 IPR012952 -
Alju07g2855 692 Gene3D - 397 514 IPR015943 GO:0005515
Alju07g2855 692 PANTHER WD-REPEAT PROTEIN BING4 168 686 IPR040315 -
Alju07g2855 692 SUPERFAMILY WD40 repeat-like 275 542 IPR036322 GO:0005515
Alju07g2855 692 MobiDBLite consensus disorder prediction 623 692 - -
Alju07g2855 692 FunFam Os01g0183100 protein 343 537 - -
Alju07g2855 692 SMART BING4CT_2 513 593 IPR012952 -
Alju07g2855 692 Pfam WD domain, G-beta repeat 435 466 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2855 327 502 U-box Gene Family AT1G04510 26.596 2.95e-11 64.7