Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2851 ATGGAATTACTCAGAGTAATACTGAAGACAGCTTTAGTCTTCTTGCTCTTTATTCAGTTTGGTCTGGCTCGAGAAATATCTTCGAGCTTCGGAATCGAAAGGCTCGCGCTGCGTCAGCTTCGATCGTCGTTGGAGATTCGTAGCAAGTACTGGCCCATAAAAGCGGAACCGTGCAGGAATTGGACCGGGGTTCAGTGCAAGAACGGGCGAGTCGTTGGGATCAACTTATCCGGTTTAAGACGAACCCGATTCGGGCATCTTCATCCCAGTTTCGCAGTGGATTCTCTTGCCAATTTCACACTCCTAGAGTCATTCGAAGCTTCTGGGTTTTCGCTCAATGGCTCTATTCCCGACTGGTTCGGACAGCGCCTGACGACACTCCAAAAGCTCGATCTAAGTTCTTGCTCACTCACGGGTCTCATTCCTCCATCGCTTGGTAATTTGAGTTCGCTGAAGCTTCTGATTCTGGCAGATAATAGTCTCACTGGGAGAATTTCTTCCACATTGGGACAATTATCTAGTTTATCCGTTCTGAATCTCTCAGGAAATTCGCTCACTGGATTAATGTCCAACTCTTTCTCGTCTCTGGTCAATCTCACAGCCCTCGACCTTTCTTCTAATTTTTTATCTGGTTCCGTTCCAGCCTATCTTGGTAACCTTAATAGGCTTAAGTTTTTGAATCTTTCCGATAATGACTTCACCGCCTCAATACCTTACCAACTGAGTAATCTTTCTCAGTTAGTTCAACTTGATCTAAGCAAGAATGCTTTTGATGGCTTTCTTCCTCCTGCATTGTGGTCAATGAGCCACCTGTCCGTCCTTGATGTATCTAGCAACAACCTTACTGGTACCCTGCCGAAACTTGGCCCAAATGTTAATTCTACCGGTGCTGTCTTCAACCTCTCAAACAATTTATTCTATGGATATCTTAATACTTCATTTAAGAAATTTAGGATCATTGATTTGTCCCGTAATTTTTTCCAAGGCAAGGTGCCTGATCATGGCTTAAGCAATATTACTCTTGATACAAATTGCCTAATAATGAGTCCGAACCAAAGGAGTTCCCGCGATTGTACAGTGTTTTATGCTCAGAGAAGGCTAATTTTTGTTGGTGCTCAAGAACCAGCCACGTCACCTTTGGCTAAAGCCGAGTCCAGAAACAACAAACGAGTGATATTTATTTTGGCGGGCACATTTGGTGGGCTTGTATTTATTGTCATTCTAGCATTAGTCCTAGTGCTGCTTCTAGGAAAATGTGGTAATAACACTGGAACTCAGGAAAGGGCAGTAAATGAAGGGGCCGTTCAACAAGGGGAAAGTCCTATGCCTCCTAAGAATCCTATGTTAGACAGTGGCATGGGAGAATCATTTAGTTATGAACAAGTGCTCCATCTGACTAGAAATTTTGCAGACGTTAATATCATCAAGCATGGTCATTCTGGGGACCTTTTCAGGGGAATCCTAGATGGTGAAGTAAGTGTGGTTGTGAAAAGGATAGATTTGAACCTAGTCAAGAGAGAATCATTCATGTTGGAATTAGAACTGCTAAGCAAGGCTTCGCATGCAAGATTGGTGCCACTACTGGGGCTCTGCTTGGAGAATGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTGCTTGCACAGAGTGAGTGGCTCAGACGATAAAGAACAATCCTTGGATTGGATCACCAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTATATTACCTGCATGATTCCAGCCCTCCCCTTGTCCATAGAGATGTCCAAGCAAGCAGTATACTTCTTGATGATAAATTTGAAGTTAGACTTGGAAGTTTGAGCGAGGTCACTACCCAAGGAGATCTTAACCAGAGTGTCATCGCAAGGTTATTTCGCAAGTCACAATCTTTTGAACAAAACAATCCTGGTTCATCACCTGCAACGTGTGCTTATGACGTATACTGTTTTGGGAAGGTTCTACTTGAGCTTGTTACCGGTAAGCTTGGTATTAGCAAGACAGATGATGACAGCACAAGAGAGTGGATAGAGCAAACATTGTCATACATAAGCATAAATGACAAGGAACAGATGACTAATATAGTAGACCCATCTCTTATAGTGGATGAGGACCTATTGGAAGAGGTGTGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCGAAGCCCTTTAAACGCCCTCCAATAGGGCATGTCCTAAAAGCACTGGAAAATCCATTGAAGATTGTGAGAGAAGAATATAATAGCAGCTCAGCTAGGTTGAGAACAACTTCATCAAGGAGATCTTGGAGCACAGCATTCTTTGGGAGCTGGAGACAGAGCTCATCGGAGAGTGCTACAGCAACTGCAAGCAGAGAGGTGATAACTGCCAGTGGCTTTAAACAAACAGGAAGAGTAGGGTCTCAGGGTAGTGGTGGAAATGATCACTCTTCTTCCCACAAGAGGTTGTCCAGTGAAGTTTTCCCTGAACCATTGGAAATCCAAGAGGTAGAAACTGGAGACGCCAGATGA 2541 0.4368 MELLRVILKTALVFLLFIQFGLAREISSSFGIERLALRQLRSSLEIRSKYWPIKAEPCRNWTGVQCKNGRVVGINLSGLRRTRFGHLHPSFAVDSLANFTLLESFEASGFSLNGSIPDWFGQRLTTLQKLDLSSCSLTGLIPPSLGNLSSLKLLILADNSLTGRISSTLGQLSSLSVLNLSGNSLTGLMSNSFSSLVNLTALDLSSNFLSGSVPAYLGNLNRLKFLNLSDNDFTASIPYQLSNLSQLVQLDLSKNAFDGFLPPALWSMSHLSVLDVSSNNLTGTLPKLGPNVNSTGAVFNLSNNLFYGYLNTSFKKFRIIDLSRNFFQGKVPDHGLSNITLDTNCLIMSPNQRSSRDCTVFYAQRRLIFVGAQEPATSPLAKAESRNNKRVIFILAGTFGGLVFIVILALVLVLLLGKCGNNTGTQERAVNEGAVQQGESPMPPKNPMLDSGMGESFSYEQVLHLTRNFADVNIIKHGHSGDLFRGILDGEVSVVVKRIDLNLVKRESFMLELELLSKASHARLVPLLGLCLENENEKFLVYKYMPNRDLATCLHRVSGSDDKEQSLDWITRLKIAIGAAEGLYYLHDSSPPLVHRDVQASSILLDDKFEVRLGSLSEVTTQGDLNQSVIARLFRKSQSFEQNNPGSSPATCAYDVYCFGKVLLELVTGKLGISKTDDDSTREWIEQTLSYISINDKEQMTNIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPIGHVLKALENPLKIVREEYNSSSARLRTTSSRRSWSTAFFGSWRQSSSESATATASREVITASGFKQTGRVGSQGSGGNDHSSSHKRLSSEVFPEPLEIQEVETGDAR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2851 846 SUPERFAMILY L domain-like 50 286 - -
Alju07g2851 846 SMART LRR_typ_2 244 267 IPR003591 -
Alju07g2851 846 SMART LRR_typ_2 268 291 IPR003591 -
Alju07g2851 846 SMART LRR_typ_2 196 220 IPR003591 -
Alju07g2851 846 SMART LRR_typ_2 124 148 IPR003591 -
Alju07g2851 846 SMART LRR_typ_2 172 195 IPR003591 -
Alju07g2851 846 Gene3D Ribonuclease Inhibitor 190 359 IPR032675 -
Alju07g2851 846 Pfam Leucine Rich Repeat 127 148 IPR001611 GO:0005515
Alju07g2851 846 Coils Coil 840 846 - -
Alju07g2851 846 Gene3D Phosphorylase Kinase; domain 1 440 544 - -
Alju07g2851 846 MobiDBLite consensus disorder prediction 800 821 - -
Alju07g2851 846 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 92 189 - -
Alju07g2851 846 MobiDBLite consensus disorder prediction 800 846 - -
Alju07g2851 846 Pfam Protein tyrosine and serine/threonine kinase 475 687 IPR001245 GO:0004672|GO:0006468
Alju07g2851 846 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Alju07g2851 846 FunFam Predicted protein 440 544 - -
Alju07g2851 846 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 98 747 - -
Alju07g2851 846 SUPERFAMILY Protein kinase-like (PK-like) 442 746 IPR011009 -
Alju07g2851 846 ProSiteProfiles Protein kinase domain profile. 469 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2851 846 Gene3D Transferase(Phosphotransferase) domain 1 545 769 - -
Alju07g2851 846 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Alju07g2851 846 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Alju07g2851 846 ProSiteProfiles cAMP/cGMP binding motif profile. 474 523 IPR000595 -
Alju07g2851 846 FunFam Putative LRR receptor-like serine/threonine-protein kinase 545 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2851 Alju-ChrAlju07 53686442 53689454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2851 33 638 Miscellaneous Gene Families AT2G16250 47.059 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Alju07g2851 PK_Tyr_Ser-Thr 8.2e-22 CL0016