Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2828 ATGGCAAAACGCTTCAAACTCAATCTCCCAATCCCTTCGTTTCAACTGTGTCGCTCAAAAAAGCTTTCCAAATTCCCCGGAAATCCAGTTCCCGCTATTTACCGTCTTTCTCCGGTGAACCCCAAGGCACGTGATCTCGCCTACCCACACATGCCGGATCCCCCTCCCACTACACCCGAAAACCATGCCCGATCCAGACCCGTTTACTGTGAATCCAGATTCTGCAAAGTGAGCAGTGACAAGGGCAAGAAAGTAAAATCCGCTGGAAGCCGAAGAAATGTGACCACAAGCGTTTCGTCCAGGAGGAGTAACTTCCTCATGGACCAAGATGAAGAAAGCGAGAGTCTAATTTCTGGTCTGAACAGCTTCTCTGATGAGTTTGTTTTTCTCGAGGCTTTCCGTGAGAGAGAAACCAGCAGGCACGTAATTAGCAGCGCAGAGAAGGTTCAGAAACAAAGATTTCAACGATCCGAAATGACAAGGAAGAAGAAGACGGCGACGATGTCGGCGGCGGGATCAATGACGCGTTGTAAGGTGGAGGGAAAGGTGAAGGAGAGCTTCGCGGTGGTAAAGAAGTCGAAGGATCCGTACGAGGACTTCAAGAAATCGATGCTGGAGATGATCATGGAGATGGAAATGTTCGAGGCCAGCGACATGGAACAACTCTTACAGTCTTTTTTGTCGCTCAACTCGCGCCAGTATCATGGAGTAATAGCGCGAGCTTTCATGGAAATCTGGCAAGAACTATTCTCTGGACCTCGCGACGACGACGACGACAAGAAATATCCCCAAGATAGATTCACTCCAAAAGTTTGCAGAGGCAAACTTGTTCTGCAATCGAAGCCAAAATTCAGATCACATATGGAGAGCGACGGCGATTTTGAGCTACGTCCCTCCTCTCCAGTGCAAGAACGAAGGTTGAAGCGTTTGAAGAAAGCAGTTAGAGTTCCTGAAGATCCCCGCCCTAATACGCCGGACTGTAACCCTTCTCCGCCTCCTGCTAATTCTCCTGAATCTGATGTCTCACACTCCGATGGCGCAAATGGCTTTGATTCTGAGGATCTTAATGTGGCAACTGCATCTTCCTTTGAGACTATTGGGGACGAAAATGGACCAAGCGCCGAGCGTGACGCTTCGGAAAGCGTCAAGGAAGATGGTTTGAGTGAGACGAGGGTTTCGGAATTTGATTCCGTGGCTGAGGATCTTGGAGGAAATGGCCGAGCTTGCTCAACGGAGGAGAAGGGGCTAGATGTCAAGGATCTTGAGACCAATGAAGTAGAGAAAAATCAACATAGCCTGGATACCTTTTCTGATAAGAGAAAGAGAAAGAAGAGCTCCGGCAGTGATAGAGGTGAGGAGAAAGTTAAAGATTCTACATCTAATAAAAAACGGGCTGAGAAGGAAAGACAGGAAAACCTTAAAAAGCTTCGGGCTGAGTCTCAGAGACTTCTACGAGAAACTCGAGATGCAGCTTTTAAACCTATTCCCGGTGTTCAGAAGCCCATTTCATCATTATTGGATAAAATTCGGCAGCGAAAGCTGGACCTTTTTAAAAAATCCGTTTCTTCTATTGACGATAATGATGATGACTTCGTGAGGGAGGTCCAAGTGGATGAGGTATCTGGGCGTGCTTGTCTTGGGGATGAGATAGCTGATAAGGTTGAACATGATGAACGTCAAGAAACTTTTACTTGTCCTGCGGACACGACGACTAATTTAGACGCATCACAGTCAGGGGGATCAGGCGATGCTACAAATTCCTTTATTTGTGAAACTGAAGGCATTCCTTGTCCGATGGTCATGGATTCAGAAGCTGATAATGTGCTTCGAGCTCCTATTAATGATACTCAGGAGCTCTATTATGATTCCCCAAGAAGTGACACCAAATATGAGGCCTTGAACGAAACGCCTGGTAGTCCTTTAGATGTTTCTGAACCACCAATCCCTTCTATGAACTTGCAACTCGATTCTGCTCCTTCTGATGATGTCTCTTCTGATGAGGAAGACAACGAAAAGGAAAATATAGATCCGCATCCGCATCCATCAGCCAACTCTTCACCACCTTCAAGTGGTGACCCTGTTAAGGCTTTCGTTGATGAAGAAGCAGAAGAAGAGGATAATAGTGACAATGACCTCATGCGCTTCCAAGAAGATGAGGATGAGGATGAAGAAGATGATGCTGAGGAGCTTAATAACATGATAGCAACTGGATTTGAAGAAAATCTAATTGATAAGGAAAGACGTGACCAACTTCACCAGCAGTGGCTGGAGCAACAGGACGCAGCTGGAATGGATAATCTGCTGCAGAAACTTAATTGCGGTTCAAAATTGAGGGACACAACATCAATTGGTGAGGAAGAAGATGAGGAAAGCAATGAAACCGAAACCGAAAACGAATCAGAAGATGAAGAATATGTTGCTCAGCCAAATGCAGCACGAATCAATTTGGAAAAAGTGAGGCAGATGATTCCTCAGATGTTCTCAGATAAAGATGATGCATATGTATCATCCGACGATGAGGAAACAGTGAAGAGGCTACCTAAACGGTGCTTATCTGCCAAAATGGTGGAGCAAACTACATTCTTGTCGCCGGCTGAGGATGAAAGTTGCAGGGAAGTTTTCAGTCTTATAAAGAAAATGAATACTGTGCCTGACACCAAGAGGAAAGGAAGGACACCCTCCTTCTTTGATACTCCGCTCATTGGACAAAACATCAACGTATTATCAAAGTCATCTTTCCTAAATCGTGCTTCAACTCTTTCGTTGCCCTCTTCTCAAAAGCATGGACCAAACAGGGCTCGTTCTTTCATTTTTGGACGAGATGACAGCAATAGCAGGACTTCAATCTCTATGTCAAAGGACTCTTTGGATACGAATCATACGCAGCGTCAACTGCCAAAATCTGGTAGTGCCAAGTATCAAAGTAATACCCAGAATCGATATCATAACTCGAACTCCACATCTCAGAAGCCAGGTACTTGTCTTCTGGAGATATTAAGGAAATCTTCACGGCATGCTGAGCGACGTTTCCAGAATGACACAGTCCAGCAAACTGAATCAGTATTTGCTGCATTCAAGTTGGCAAAGAAGCCAATTCAGACAGAGGGAAGAGTGTGA 3117 0.4546 MAKRFKLNLPIPSFQLCRSKKLSKFPGNPVPAIYRLSPVNPKARDLAYPHMPDPPPTTPENHARSRPVYCESRFCKVSSDKGKKVKSAGSRRNVTTSVSSRRSNFLMDQDEESESLISGLNSFSDEFVFLEAFRERETSRHVISSAEKVQKQRFQRSEMTRKKKTATMSAAGSMTRCKVEGKVKESFAVVKKSKDPYEDFKKSMLEMIMEMEMFEASDMEQLLQSFLSLNSRQYHGVIARAFMEIWQELFSGPRDDDDDKKYPQDRFTPKVCRGKLVLQSKPKFRSHMESDGDFELRPSSPVQERRLKRLKKAVRVPEDPRPNTPDCNPSPPPANSPESDVSHSDGANGFDSEDLNVATASSFETIGDENGPSAERDASESVKEDGLSETRVSEFDSVAEDLGGNGRACSTEEKGLDVKDLETNEVEKNQHSLDTFSDKRKRKKSSGSDRGEEKVKDSTSNKKRAEKERQENLKKLRAESQRLLRETRDAAFKPIPGVQKPISSLLDKIRQRKLDLFKKSVSSIDDNDDDFVREVQVDEVSGRACLGDEIADKVEHDERQETFTCPADTTTNLDASQSGGSGDATNSFICETEGIPCPMVMDSEADNVLRAPINDTQELYYDSPRSDTKYEALNETPGSPLDVSEPPIPSMNLQLDSAPSDDVSSDEEDNEKENIDPHPHPSANSSPPSSGDPVKAFVDEEAEEEDNSDNDLMRFQEDEDEDEEDDAEELNNMIATGFEENLIDKERRDQLHQQWLEQQDAAGMDNLLQKLNCGSKLRDTTSIGEEEDEESNETETENESEDEEYVAQPNAARINLEKVRQMIPQMFSDKDDAYVSSDDEETVKRLPKRCLSAKMVEQTTFLSPAEDESCREVFSLIKKMNTVPDTKRKGRTPSFFDTPLIGQNINVLSKSSFLNRASTLSLPSSQKHGPNRARSFIFGRDDSNSRTSISMSKDSLDTNHTQRQLPKSGSAKYQSNTQNRYHNSNSTSQKPGTCLLEILRKSSRHAERRFQNDTVQQTESVFAAFKLAKKPIQTEGRV 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2828 1038 Coils Coil 713 733 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 921 993 - -
Alju07g2828 1038 Coils Coil 448 486 - -
Alju07g2828 1038 Pfam Transcriptional repressor, ovate 193 250 IPR006458 -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 776 806 - -
Alju07g2828 1038 NCBIfam uncharacterized plant-specific domain TIGR01568 187 250 IPR006458 -
Alju07g2828 1038 ProSiteProfiles OVATE domain profile. 189 248 IPR006458 -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 784 804 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 412 480 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 282 319 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 629 736 - -
Alju07g2828 1038 PANTHER DNA LIGASE-LIKE PROTEIN 288 1038 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 322 336 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 565 584 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 354 368 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 370 396 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 282 480 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 698 730 - -
Alju07g2828 1038 MobiDBLite consensus disorder prediction 938 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2828 Alju-ChrAlju07 53544951 53552711 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju07g2828 Ovate 1.8e-21 No_clan