Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2803 ATGAACCAGTATAGGCCACGGGTTCCTATCACTATGACTAAGCAAAGAGGGCAACCACAGCCTCCTTTTCTAACAGACGTGGAGTCAGATAGATTAAGTTGCTTACCAGGCCATGTTATTGATCAGATTCTGTCACATTTGTCAATTCGGGAAGCAGTGAGGACTAGTGTTTTATCCAGGAAATGGAGGTACAAATGGTCTACTCTACCAAATCTTGTGTTTGATAACCAGTGTCTCACCATATCTTCCCAAGATCATTCAATTATCAAGAACAAGCTTGTGAGAATTGTTGATCATGTGCTTTTGCTTCACTCTGGTGCCATAAAGAAGTTTAAGCTCTCCCATCGTGATCTAATTGGTGTGACTGACATCGATCGTTGGACTCTTCATCTAACCAGAAGATCTATCAAAGAGCTTGTGCTGGAAATCTGGAAAGGGCATCGCTACAAGATGCCCTCTTGTTTATTTACTTGCCAAAGTTTAATTCATCTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACAATTATGGGCTTCAGGAACTTGAAGAGTCTTGATCTACAGCATGTTATTATGGATCAAGATGTGTTTGAAAACTTGATATCTAACTGCCCACTGCTTGAACGTCTAACACTGATGAACTTTGATGGTTTCACTCATCTCAACATCGATGCACCGAATCTTCAGTCTTTTGACATTGGAGGCAAATTTGAGGATGTTAAATTTGAAAACACCTTCCATTTAGCTGTTGTATCCATTGGTTTGTATTTGAACCTTGAAAATGAGAAAAATAGATGGCAAGGAAGTTCTAGCAATTTGCTCAAGTTCTTTGTTCATTTACCTCATGTTAGAAGGTTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGAGTTGTGCCACTAAAGCTTCCTAGACCATGCGTAGATTTAACTTATCTTTCCATACGCATCAATTTCAATGATTCCAAGGAAATTTCAGCTGCTTTGTGCCTTTTAAGGAGTTCTCCGAATCTTCAAGAACTGGAGGTGTTGGCTCGCACTGAGGAGGAACAGAGTACACTGGGAACACAGGCATATTGTTGGGAGGATGAGTATTGGAATTGCCCAGTGATGCAACTGCAATATGTTAGGATAGACGGTATCTCTGGCATCAAACCCGAACTAGATTTTATCAGCTTTCTGCTTTTATATTCTCTCGTTCTAGAACGGATGACTGTGAAGCCTACTTCTTCAAATGGAGGATCAGAGTTAATGAAAGAATTATTGCGGTTCAGGAGAGCATCTGGGCGAGCTGAAATTATATACCTGGATCCTTGA 1326 0.4027 MNQYRPRVPITMTKQRGQPQPPFLTDVESDRLSCLPGHVIDQILSHLSIREAVRTSVLSRKWRYKWSTLPNLVFDNQCLTISSQDHSIIKNKLVRIVDHVLLLHSGAIKKFKLSHRDLIGVTDIDRWTLHLTRRSIKELVLEIWKGHRYKMPSCLFTCQSLIHLELFNCWLKPPSTIMGFRNLKSLDLQHVIMDQDVFENLISNCPLLERLTLMNFDGFTHLNIDAPNLQSFDIGGKFEDVKFENTFHLAVVSIGLYLNLENEKNRWQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPLKLPRPCVDLTYLSIRINFNDSKEISAALCLLRSSPNLQELEVLARTEEEQSTLGTQAYCWEDEYWNCPVMQLQYVRIDGISGIKPELDFISFLLLYSLVLERMTVKPTSSNGGSELMKELLRFRRASGRAEIIYLDP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2803 441 MobiDBLite consensus disorder prediction 1 21 - -
Alju07g2803 441 SUPERFAMILY RNI-like 129 345 - -
Alju07g2803 441 SMART 9598neu4hmm 370 439 IPR006566 -
Alju07g2803 441 SMART fbox_2 35 75 IPR001810 GO:0005515
Alju07g2803 441 PANTHER F-BOX PROTEIN-LIKE 30 413 - -
Alju07g2803 441 Pfam Leucine Rich Repeat 182 206 IPR013101 -
Alju07g2803 441 SUPERFAMILY F-box domain 30 74 IPR036047 GO:0005515
Alju07g2803 441 ProSiteProfiles F-box domain profile. 29 77 IPR001810 GO:0005515
Alju07g2803 441 Gene3D - 23 119 - -
Alju07g2803 441 Pfam F-box domain 32 65 IPR001810 GO:0005515
Alju07g2803 441 Gene3D Ribonuclease Inhibitor 127 252 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2803 Alju-ChrAlju07 53378217 53380304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2803 27 249 EF-hand Containing Proteins AT5G41840 25.714 8.79e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2803 07 53378217 53380304 Alju07g2803 07 53378217 53380304 ECH