Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2791 ATGTTCACCACATCTCATCCTGTAATTCGAAGCTTGACAAGCTTGCCAGACCTATCCTTAAACATAAGCCCACCATGTATTTCAGAATGGGAGGCCAAAGAGGTTAGGAGCAAAACACTTTACAATGATATATGCTCAACCTCTGATTCTGGTAGCAGTGCTGGAAGTGACTTTAGCCATGAGAATAGCTTTCTTCATCACCTTGGCCATCCTGAGCCCACGTTGAGCCTTGCCTTAGGAACCCCTGATTTGATAAATCATCCCCATCTTTTACAGGCACTCACAAGGAACGTTAATCCTCATCACTTCCACAACCACCAACCCCATATTTATGGCAGGAGCTTTAAACGAAATGCAAGAGTCATTAATGGTGCCAAAAGAAGCGTTAGAGCTCCTAGAATGAGATGGACCACAACTCTCCACGCCCAGTTTGTTCGTGCTGTCCAGCTCCTTGGCGGTCATGAAAGGGCTACTCCAAAGTCGGTATTAGAGTTGATGAGTGTTAAGGATCTAACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTACAGAACAGTGAAGAGCACCGACAAAGGGACAGGTCATGGGCAGGCAGATATGAGTTTGAACCGAAGGCCGGAGAACAATGTGGATGTGCTTGGAGCTTCAGGCTGTGAGGGAGCCCGTTTATCATCACCACAATCGCTCCAGAAATCCCTCAGAGCATCATGGCAATCGTCAATGGATACAAATACAAATGACAGTAGACAAACCCCCCAAATTGATGATTTGACTCATTCTCATGATCTCAAGACAAAGGAAACAAAGGTGGATGGAGCTAATAGAGGGCTGTGGAATTGCGTGAAGGAGAGGTTGGATTGTAGCAATTTGTCACGTTCGGATTTGATGCTTGACCTCGAATTCACACTCGGACGACCCAGTTGGCAATACAGACTCTAA 939 0.4611 MFTTSHPVIRSLTSLPDLSLNISPPCISEWEAKEVRSKTLYNDICSTSDSGSSAGSDFSHENSFLHHLGHPEPTLSLALGTPDLINHPHLLQALTRNVNPHHFHNHQPHIYGRSFKRNARVINGAKRSVRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELMSVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQADMSLNRRPENNVDVLGASGCEGARLSSPQSLQKSLRASWQSSMDTNTNDSRQTPQIDDLTHSHDLKTKETKVDGANRGLWNCVKERLDCSNLSRSDLMLDLEFTLGRPSWQYRL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2791 312 MobiDBLite consensus disorder prediction 186 259 - -
Alju07g2791 312 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 309 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju07g2791 312 FunFam Myb family transcription factor 130 188 - -
Alju07g2791 312 Gene3D - 131 188 - -
Alju07g2791 312 SUPERFAMILY Homeodomain-like 129 186 IPR009057 -
Alju07g2791 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 185 IPR006447 GO:0003677
Alju07g2791 312 MobiDBLite consensus disorder prediction 221 253 - -
Alju07g2791 312 Pfam Myb-like DNA-binding domain 133 184 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2791 Alju-ChrAlju07 53277373 53279668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2791 1 234 G2-like Transcription Factor Family AT5G42630 49.160 6.06e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju07g2791 Myb_DNA-binding 5.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2791 07 53277373 53279668 Alju08g1125 08 8429774 8433449 CCT
Alju07g2791 07 53277373 53279668 Alju07g2791 07 53277373 53279668 ECH