LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2787	ATGCAGGTCTCGAGTTGCTTCCCATTTATATTGTTTCTGGTTGTATTTACATCCTTGGCAAATGCTCTTTCTAATGTTGACGCCTCCTTTATTGCTCGTCGGCAATTGTTAACACTACGTGAGAATGAAGACTTGCCTGATAATTACGTAGAGACCTATAAAACACAACTAACTTTTCCCAATACTAGACTCAAGAGTGCTTATATTGCACTTCAAGCATGGAAATCGGCAATGTATTCGGACCCTTTTCAGACCACCAAGAATTGGGTGGGACCAGATGTTTGTTCCTATAATGGGATTTTTTGTGCCCCGGCGTTGGACGATCCAAACACCACCGTTGTGGCCGGCATTGATCTTAATCGGGCAGACATCGCGGGCTTTATTCCCGCCGAATTTGGTTTGATGACCGACCTTGCTTTAATTCACATCAACTCAAACAGGTTTTGTGGGATTCTTCCCAAGTCTTTCTCCAAGTTGAGGCTTTTGTTTGAGTTGGATATCAGCAATAACCGCTTTGTTGGCCTGTTTCCGGAGTGTATTCTGCCACTTCTGGATCTTAAGTACATTGACCTTAGATACAATAACTTTGAAGGTCAACTTCCTCCGGAGCTTTTCAACAAGCCTGTCGATGCTATATTTTTGAACAACAATCGGTTTACATCCACAATTCCTGAAAATCTCGGGAATTCTTCGGCCTCCGTGATAGTGTTTGCCAACAACAACTTTGAAGGTTGTATTCCTAAAAGCATAGGTAAAATGGGAGCAACATTGAATGAGATTGTGTTTGCCAACAACAATCTCACTGGCTGCCTGCCAATGGAAATTGGAAAGCTTGCAAGTGTGACAGTTTTTGATGTGAGCAAAAATGTGTTTGGTGGCATCTTGCCCAAGTCCTATGACGGACTCAAAAGGGCAGAAGTGATATCAATTGCCCACAACAAATTCACTGGTTTTGTCCCACAAAGCATATGTAGCTTGCCTAGCTTGGTAAATTTCACATTTGTAGATAACTATTTTAATGGTGAGGAGCAAGGTTGTGCAGCTTCTTCTAGAAAGAATGTTGTGTTTGATGATGCTGGCAACTGCTTGCCAAACAAGTCAAATCAAAAGGAAACAAGTGTTTGCTCTGTTGTGACAAGCAAGCCTGTTGATTGTAGTAAGCAACAATGTGGTCATCCATCCTCAGGTTCAAAACCACAACCACCTAAAGAGGAACCTGCTAAACCAAAACCAAAACCACAACCACCTAAAGAGGAACAACCTAAATCTCATGCACCGCCACATCAAACTCCTGAAACACTTCATCCCCAACCACCAAAAGAGGAAAGTCCTAAACCTCAACCTCCGCAACATAGCCCTAAATCTCCACCGACCCAATCTCACTCAACACCCCAACCATCTCCTGATCCTTTTGACATAAATCCTAAACACCCACGTCGACCCAGCTTTCCACCGACTCAATCTCCCTCATCACCGGCCTACTCTTCTCCGCCGACACCTATCCATTCTACACCATCAGTTTACTCTCCCCCACTGACTCAATCTCCCTCGCATCCGACTTACTCTCCACTTCCACCCCCTGTCCACTCTCCACCCCCACCAGTTTACTCACCACCACTACCTCCTATCAACTCTCCACCTCCACCATCTCACTCTTCCCCGCCTCTGATCTACTCTCCACATCCCCCATCTCCCGCCTTTTCACCTCCACCCCTAATTCATTCTCCTTCGCCTCCTATCTTTTCACCCCCGCCACTAGTACATTCTTCTCCCCTTCCAGCACATTCTCCTCCGCCTCCTGTCTTTTCACCCCCACCCCCAGTTCATTCTCCTCCCCCTCCTGTATTTTCACCCCCGCGTCATTCTCCTCCGCCTCCTATATTTTCACCTCCCCCTCCAGTACATTCCCCTCCGCCCCCTATCCATTCTCCTCCACCCCCAGTTTTCTCCCCACCCCCACCTATCCATTCTCCTCCACCACCTATCTCCTCTCCCCCTCTACCTACTCAATCCCCATCACCTGTTTCTCCTCCCCTATCAACACCTCCTCCAGAAGATGACATTATTCTTCCTCCAATTTTTGGTGCTTCGTATGCATCACCGCCTCCACCGCTCATCTCTGGCTACTGA	2130	0.4676	MQVSSCFPFILFLVVFTSLANALSNVDASFIARRQLLTLRENEDLPDNYVETYKTQLTFPNTRLKSAYIALQAWKSAMYSDPFQTTKNWVGPDVCSYNGIFCAPALDDPNTTVVAGIDLNRADIAGFIPAEFGLMTDLALIHINSNRFCGILPKSFSKLRLLFELDISNNRFVGLFPECILPLLDLKYIDLRYNNFEGQLPPELFNKPVDAIFLNNNRFTSTIPENLGNSSASVIVFANNNFEGCIPKSIGKMGATLNEIVFANNNLTGCLPMEIGKLASVTVFDVSKNVFGGILPKSYDGLKRAEVISIAHNKFTGFVPQSICSLPSLVNFTFVDNYFNGEEQGCAASSRKNVVFDDAGNCLPNKSNQKETSVCSVVTSKPVDCSKQQCGHPSSGSKPQPPKEEPAKPKPKPQPPKEEQPKSHAPPHQTPETLHPQPPKEESPKPQPPQHSPKSPPTQSHSTPQPSPDPFDINPKHPRRPSFPPTQSPSSPAYSSPPTPIHSTPSVYSPPLTQSPSHPTYSPLPPPVHSPPPPVYSPPLPPINSPPPPSHSSPPLIYSPHPPSPAFSPPPLIHSPSPPIFSPPPLVHSSPLPAHSPPPPVFSPPPPVHSPPPPVFSPPRHSPPPPIFSPPPPVHSPPPPIHSPPPPVFSPPPPIHSPPPPISSPPLPTQSPSPVSPPLSTPPPEDDIILPPIFGASYASPPPPLISGY	709

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2787	709	SUPERFAMILY	L domain-like	68	345	-	-
	Alju07g2787	709	MobiDBLite	consensus disorder prediction	440	505	-	-
	Alju07g2787	709	PRINTS	Proline rich extensin signature	437	458	-	-
	Alju07g2787	709	PRINTS	Proline rich extensin signature	399	415	-	-
	Alju07g2787	709	PRINTS	Proline rich extensin signature	424	436	-	-
	Alju07g2787	709	PRINTS	Proline rich extensin signature	462	478	-	-
	Alju07g2787	709	Gene3D	Ribonuclease Inhibitor	67	362	IPR032675	-
	Alju07g2787	709	MobiDBLite	consensus disorder prediction	384	709	-	-
	Alju07g2787	709	FunFam	Leucine-rich repeat extensin-like protein 1	68	229	-	-
	Alju07g2787	709	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	17	600	-	-
	Alju07g2787	709	Pfam	Leucine rich repeat	138	196	IPR001611	GO:0005515
	Alju07g2787	709	MobiDBLite	consensus disorder prediction	403	425	-	-
	Alju07g2787	709	MobiDBLite	consensus disorder prediction	516	689	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g2787	Alju-ChrAlju07	53246247	53248376	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g2787	13	431	Trihelix Transcription Factor Family	AT2G15880	58.333	5.65e-172	508