Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2777 ATGCCTTCGTCTCGCAAATCATCTTCTTCTCCAACTCCTATCCCCTCCACGCCTTCATCTATTTATCCTTCTGACCTCAAACAAACTGACGTCGATGCCTCTGGCAATGCCGCCTGTTTCGTTCACAGCACGGAGCAATTGACTCCCGGCCGCCGCCGCCTTACTCGAGCCAGGAAGCTTCGCTACCTCTCCGACCATGATGTTGGCTTGCACCTCACTGACGATTCTTTGCTCCTGCCTTCCCCTCCGTCCTCTCGCAAGAGTCGCTCATCGGGTGGTTCTGAACACTGGTCCTCCTCCGCTGTGCCTCAACCCCTGCCGCTTCCCGATTCGCCGTTGACTCGCCGACCGGAGTCAACCGGTTCTAATACCGGACAGTCCCATCTCGGATCGCCTTCCGTAGACCATCCGGGATTTGCTTTCGGGAGGAAGACGGTGGATCAAGATGCATTCATAAACATGAAGTCTTGGAGTAATATGGATAGATCTTGTGATCCAACCACTGCAAACTCGAAGTTTCATTTGAGAGTAAACATCCCGGTTGCCAGTTTCTTGACAGGTCATAGTTCGTGTAAAGATCGAGCAATCTCTCATGATACTGACTCTGAAAATATTTATGACTCAAGAAGGCGTGTGGCCATAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACAAGTCCACGCAGATCAAGCAATGTAGATTTCACTGATCATTTCTTTAGTACTCAAGAATATCTTGACAACCCCGTTGTTCATCTTACGAAAGTGTCTCCACACTTGACTGTTCAAAGTCCAGGCCATTCTTCCCTCCGTAGCCCAGGGTGCCGTAGTCCTTTCCTCAATCTCAAAATCCAAGATAATAGATTTCATTCCAGGGCGTGGCCAGAAAATAACCATGTTGACGCACATCCTTTGCCTCTCCCTCTTCCTCCTGGAGCTTCACCACCAGCACCATCATTTGTGCAGTGTCAATCGAGTCCCATGCATCACTCATTTGAAGGTCAATTTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCAACAAACCTAGAGACCGGTGCTTCATGCGCAATGAAGGAGGTGGATCTCATTCCAGATGACCCTAACTCTGCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCATCAACTACACCATCCAAATATTGTGGAGTATTATGGCAGTGAAATAATTGGTAATCACTTGTGCATATATATGGAGTATGTTCATCCAGGGTCAGTTGATAAATTTGTGCGGGCAAACGGTGAAGCGATGACAGAGTCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCAGGGTTGGCTTACCTCCACAGTACCAAAACTATCCACAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCAAAAGCTCTAACAGGGAAATCATATGAACTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCGATGATAAAAGATGACAATCCTGACCTTGCCTATGCTGTTGATATCTGGAGCTTAGGTTGTACTATCATAGAGATGCTAACGGGTAAACCTCCCTGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCATCGATACCTGAAACACTATCTTCAGCAGGAAGGGATTTTCTTCAGAAATGTTTTGAAAGGGATCCTGCAAATCGGCCATCTGCAGCTAGGCTTCTTGAGCACGCCTTTGTACTAAATTTGCCTGATCAAGATGCTTTAGCTCGCCCACAATTATATCCTAGAGAAAACCCTGAAGATAATTCACGTAGTCCCAAAGACACTCCTACGCATAAACGTGATGTAATTCGAGCCTCTATAGGTGCACGGTTCATCAACAAAATCCAGAAATTAATCGGTGATTCTTCCCAACAATATAATGCTGAGGATTCTAGATATTCTACGTCCCATCATCCTCCTTACTCTCTGCCACAAGTTAAAATTCCTCAGTCGTCCTTGAAACCAGCTGCCCTCAATTACGCTTCTGCTTCAAAATCCAGCAACATGCCCATTGCTGTAAAGAGAGTCATCACGCACCTTTGA 2163 0.4614 MPSSRKSSSSPTPIPSTPSSIYPSDLKQTDVDASGNAACFVHSTEQLTPGRRRLTRARKLRYLSDHDVGLHLTDDSLLLPSPPSSRKSRSSGGSEHWSSSAVPQPLPLPDSPLTRRPESTGSNTGQSHLGSPSVDHPGFAFGRKTVDQDAFINMKSWSNMDRSCDPTTANSKFHLRVNIPVASFLTGHSSCKDRAISHDTDSENIYDSRRRVAIKSAPTSVFSSPVTSPRRSSNVDFTDHFFSTQEYLDNPVVHLTKVSPHLTVQSPGHSSLRSPGCRSPFLNLKIQDNRFHSRAWPENNHVDAHPLPLPLPPGASPPAPSFVQCQSSPMHHSFEGQFSMKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDLIPDDPNSANCIKQLEQEIKILHQLHHPNIVEYYGSEIIGNHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKALTGKSYELSLKGSPYWMAPEVMKAAMIKDDNPDLAYAVDIWSLGCTIIEMLTGKPPWSDFEGPQAMFKVLHNSPSIPETLSSAGRDFLQKCFERDPANRPSAARLLEHAFVLNLPDQDALARPQLYPRENPEDNSRSPKDTPTHKRDVIRASIGARFINKIQKLIGDSSQQYNAEDSRYSTSHHPPYSLPQVKIPQSSLKPAALNYASASKSSNMPIAVKRVITHL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2777 720 FunFam Predicted protein 340 629 - -
Alju07g2777 720 SMART serkin_6 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2777 720 SUPERFAMILY Protein kinase-like (PK-like) 323 634 IPR011009 -
Alju07g2777 720 MobiDBLite consensus disorder prediction 626 640 - -
Alju07g2777 720 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Alju07g2777 720 MobiDBLite consensus disorder prediction 115 131 - -
Alju07g2777 720 MobiDBLite consensus disorder prediction 1 29 - -
Alju07g2777 720 MobiDBLite consensus disorder prediction 78 101 - -
Alju07g2777 720 MobiDBLite consensus disorder prediction 73 140 - -
Alju07g2777 720 ProSiteProfiles Protein kinase domain profile. 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2777 720 MobiDBLite consensus disorder prediction 620 640 - -
Alju07g2777 720 Gene3D Transferase(Phosphotransferase) domain 1 341 642 - -
Alju07g2777 720 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 618 - -
Alju07g2777 720 Pfam Protein kinase domain 345 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2777 Alju-ChrAlju07 53161485 53166688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2777 51 607 MAP Kinase Kinase Kinase AT5G66850 46.321 2.06e-145 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju07g2777 Pkinase 8e-67 CL0016