Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2749 ATGATGATTATAGTCCGCAGGAACGGCGTTGGAGTTACTGGTTTTGGAATTCTCGAAATGGGTAGGTGTTGGTTGGTTGGGATTTTGATTGTTTTGGCCAATGCGTGGCCCTTGGCCCAAGGGTACCCCTCGGAAGATCTGGTGGTGAGTCTCCCTGGTCAACCCAAGGTTGGGTTTAGGCAGTATGCTGGGTACGTTGATGTAGATGTTAGCCATGGAAGGAGTTTGTTCTACTACTTTGTGGAGGCTGATAAGGACGCCGACCTGAAGCCCCTTACTCTCTGGCTCAATGGAGGTCCGGGATGTTCCTCCATCGGAGGAGGTGCCTTCACTGAATTGGGACCCTTCTATCCTCAAGGTGATGGCCGTGGTCTCCGAAGAAATACAATGTCTTGGAATAGAGCATCTAACCTCTTGTTTGTGGAGTCACCCGCCGGCGTTGGGTGGTCATACTCGAATACAACTTCAGATTATACCTGCGGAGATGCTTCCTCCGCCAATGACATGTATTTATTCATGTTGAAATGGTACGAGAAATTTCCTACATTCAGAACAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCTAATGCTCTGCTGAACCATAACGAAGCCTCAGGTGACTTCAAAATCAATATTAAAGGAGTTGCTATTGGAAACCCACTGCTGAGACTTGATCGGGACATTCCATCAACATATGAATTCTTCTGGTCGCACGGAATGATTTCTGATGAAATAGGCCTTGCCATTACAAATGGGTGCGATTTTGACGATTATACCTATGCAAGTCCTCACAATGTGTCGGATTCTTGCAATCGTGCTATATGGGAGGCAAATCGCATAGTTGGGGATTACATCAACAACTATGATGTGATTCTGGATGTTTGCTATCCATCCATAGTTGAACAAGAGCTGAGATTAAAAAAGATGGCTACCAAAATGAGTTTGGGCGTAGATGTTTGTATGTCCTATGAAAGACGCTTTTACTTCAATCTTCCTGAGGTTCAGAAGGCCCTCCATGCTAATCGAACCAATCTCCTATATTCCTGGTCTATGTGTAGCAGCATTTTAAATTATAGTGACACTGATGGGAACATCAATATCCTTCCGATTCTCAAGAGGATCGTTGAAAATAAAATCCCAGTTTGGGTTTTCAGTGGAGACCAAGATTCAGTGGTGCCATTACTGGGTTCTCGAACACTGGTTCGTGAACTAGCCCATGACCTGAAGTTGGGCGTGACGGTTCCATACGGAGCATGGTTCCACAAAGGGCAGGTGGGAGGTTGGGCAACAGAGTATGGAAACTTGTTGACATTTGCGACGGTGAGAGGGGCTGCTCACATGGTGCCTTACGCACAGCCTTCGAGATCTCTCCATCTTTTCAGTTCATTTGTGCGTGGCCGCCGCTTGCCCAACACCACTCGTCCTTCCATTGATGACTGA 1467 0.4656 MMIIVRRNGVGVTGFGILEMGRCWLVGILIVLANAWPLAQGYPSEDLVVSLPGQPKVGFRQYAGYVDVDVSHGRSLFYYFVEADKDADLKPLTLWLNGGPGCSSIGGGAFTELGPFYPQGDGRGLRRNTMSWNRASNLLFVESPAGVGWSYSNTTSDYTCGDASSANDMYLFMLKWYEKFPTFRTRELFLTGESYAGHYIPQLANALLNHNEASGDFKINIKGVAIGNPLLRLDRDIPSTYEFFWSHGMISDEIGLAITNGCDFDDYTYASPHNVSDSCNRAIWEANRIVGDYINNYDVILDVCYPSIVEQELRLKKMATKMSLGVDVCMSYERRFYFNLPEVQKALHANRTNLLYSWSMCSSILNYSDTDGNINILPILKRIVENKIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKLGVTVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFVRGRRLPNTTRPSIDD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2749 488 Gene3D alpha/beta hydrolase 43 305 IPR029058 -
Alju07g2749 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 462 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 Gene3D - 376 475 - -
Alju07g2749 488 FunFam Carboxypeptidase 376 475 - -
Alju07g2749 488 Gene3D - 329 365 - -
Alju07g2749 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 Pfam Serine carboxypeptidase 53 475 IPR001563 GO:0004185|GO:0006508
Alju07g2749 488 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Alju07g2749 488 FunFam Carboxypeptidase 42 306 - -
Alju07g2749 488 SUPERFAMILY alpha/beta-Hydrolases 48 478 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2749 Alju-ChrAlju07 52948734 52953805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2749 335 478 Calmodulin-binding Proteins AT2G22960 26.389 5.30e-11 60.1