Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2748 ATGCAGAGTTGCTGCAACCTCACCCCCCAACCATGGGCCCCGACCAGCCTATATCGCACAAACCGCCATCCCCGATTACCGACCCACGCCATCAGTATCCGGTTACCACCGTCGATCTCCGCCGTGGCCGCCCCGGTCAAAAATCGAAAGGCCCACTCAATGCCGCCGGAGAAGGCCGAAGTGTTCAAATCCCTGGAACGCTGGGCTTCGGAGGGGCTTCTGCCGCTGCTGAAGCCGGTGGAGCAGAGTTGGCAGCCACAGAATTTCGTGCCCGACTCATCGTTGCCGTTCGATGAATTCATAGATCAAGTGAAGGCACTGCGAGATCGGACGGCCGAGCTCCCTGATGAGTACTTCGTGGTACTTGTGGGTGATATGATCACGGAGGATGCACTGCCTACCTATCAGAGCATGATAAACAACCTGGATGCGGTCGGGGACGAGTCCGGAGCAAGCCCGGATCCATGGGCCGTTTGGACCCGTTCTTGGACGGCGGAGGAGAATAGGCATGGGGATTTACTGAGAACATATCTCTATCTATCCGGTCGGGTTGATATGCACATGGTCGAAAAAACTGTACAGTATTTGATAGGAGCCGGAATGGATCCGGGTACGGAAAACAACCCATATCTGGGATTCGTGTACACGTCGTTTCAAGAGCGAGCCACATTTGTGTCACACGGCAACACGGCTCGGTTAGCGAAGGAGGGGGGAGATCCGGTGCTGGCGCGCATATGTGGCACCATCGCAGCAGACGAGAAACGCCACGAAAATGCTTACGCGAGAATCGTCGAGAAGCTGCTGGAAGTGGACCCCACTGGAGCAATGCTGGCCATCGCAGACATGATGCACAAGAAGATCACCATGCCGGCCCATTTGATGTACGACGGGCAGGACCCGCGCCTGTTCGAGCATTTCTCTGGGGTGGCACAGCGGATGGGGGTGTACACGGCGAACGACTACGCGGACATATTGGAGTTTCTGATCGGACGATGGGGGTTGGAGAAGCTGGAAGGGCTGACGGGCGAAGGTAGGCGTGCACGGGATTTCGTGTGTGGACTAGCACCGAGGATTAGGAAGTTGCAAGAGCGAGCCGATGAGCGAGCGCGCAAGATGGGGCCTCATGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACCATGTGA 1176 0.5672 MQSCCNLTPQPWAPTSLYRTNRHPRLPTHAISIRLPPSISAVAAPVKNRKAHSMPPEKAEVFKSLERWASEGLLPLLKPVEQSWQPQNFVPDSSLPFDEFIDQVKALRDRTAELPDEYFVVLVGDMITEDALPTYQSMINNLDAVGDESGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMHMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYARIVEKLLEVDPTGAMLAIADMMHKKITMPAHLMYDGQDPRLFEHFSGVAQRMGVYTANDYADILEFLIGRWGLEKLEGLTGEGRRARDFVCGLAPRIRKLQERADERARKMGPHGVKFSWIFNKEVALTM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2748 391 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 45 387 IPR005067 GO:0006631|GO:0045300
Alju07g2748 391 Gene3D Ribonucleotide Reductase, subunit A 42 389 IPR012348 GO:0016491
Alju07g2748 391 Pfam Fatty acid desaturase 57 383 IPR005067 GO:0006631|GO:0045300
Alju07g2748 391 SUPERFAMILY Ferritin-like 46 387 IPR009078 -
Alju07g2748 391 CDD Acyl_ACP_Desat 57 365 IPR005067 GO:0006631|GO:0045300
Alju07g2748 391 PIRSF Dlt9_acylACP_des 15 389 IPR005067 GO:0006631|GO:0045300
Alju07g2748 391 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 41 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2748 Alju-ChrAlju07 52938200 52939713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2748 34 389 Acyl Lipid Metabolism Gene Families AT1G43800 77.072 0.0 585