LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2732	ATGGAAGACGGCAGATTTCCCGCCATATCTGCTAACGAAGAATATCCTGAGAATATGTCATTCGAATGTTCTGGACGGTCGGTTCAATCAACTGGTCGAGAGCGAGAGAGGATAGAGGAAAACGAAGCTTCTGCTCTGGAATCTTTAGACAACCCAGACACACATTCTTATGTCGTCATTGCATGGGATGCCACCAAAGATCGAAGTGAGAACGACATCAAGCTCATGGTTGATAACGTTCGAAATAAGAGTGGCATTCTCAGTGCGGGTCACAAACTGCTTGTGCTCGGCCTTCTGTATAAGGTGCCTCATCCCATGGGATACCAGACGTTAGCATGCCCCGAGTCTTTTGCTGGCACTAACTTGCGTGCAATGGAGGACGAGGTTAGGAGGAAAGTGGAAGCCTATGCAAGCATGCTTTTGCCAACTTTCCAAGTTTGCCAAAAGGAGGGGGTCAGCATTGAAGTCAAAGTCGCTGCAGGTTTTCCAGTTAAACTGGTTATTTTACAAGAGATTGCGCACTATAATGCAGATTGGATAATACTGGATAGACATCTTCGACGAGATCTGAGATATCATTTGAACAAGATCCCGTGTAAGGTTGCATTAGCTAGGGATGATTTCACTGTGGAGACTTGGAGATCTCACCATTCGCGTGAAGCAGATTTCACAGATCACAAGCCTGTCTATTCTCTGTCCCGTGTTGTTTCGCTATCAGATGCTCATAATTTTGAAGACCCCCAGCATTCTGTCCTTCATGGTACCTCTGATTTTCTCGAGGTCCTTGCAAAACATTCAAATGCTAGCAGCTCACGGGACAACATTTCTTCATCACACTTCGGATCTTCTTCTAAGCAAGAAAAATCAGGTATAAGCCCCAAAGGTGAATCCAAGCAAAATAAATATGGGCTTCTTCCGAAATCTTCAGATTTTCCAATTCTTTGTGCTGGTTGTGGGATAAGGACGGAATTGTGCGCGAAGGAATCAATGAGGTTCAGCTATTCTGACATACAGAAGGCAACAAACAATTTTTCAAATGATAACTTGTTGGGTGAAGGTGGATATGGTCATGTATACAAGGGTGTGCTTAGAAACGGACAGCAAATTGCAGCCAAGGTGAGAAAAGAAGAAAGCAGACAAGGGTTTTCTGAGTTCAATTCTGAGATTTATGTCTTAAGTTTTGCGCGACACAAGAACATAGTGATGCTGCTAGGTTACTGTTGCAAGGAAAGGCAAAATATTCTGGTGTACGAATATATTTGCAATAAATCTCTTCACTGGCATCTGTATGATAAAAACGCAGAAGTTCTGGAGTGGCACCAAAGATATGGCGTTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTGCACGAGGAATGCCGTGGAGGTCCAATAATTCACCGAGATATGCGACCAAGCAATATACTTCTTACTCATGACTTTGTTCCCATGCTAGGTGATTTTGGTCTGGCTAAATGGGAGATGGATGATGAGACTCTGCGAACAAGGATAATGGGCACATTGGGATACCTTGCTCCAGAGTATGCAGAGGATGGGATTGTTTCAGTGCGGACAGATGTGTATGCGTACGGTGTTGTGCTGTTACAATTGATATCAGGACGTAAGGTGGTCAATGACAATCATCTCCCACAAATCTCTCTCCGACAGTGGGCGGAGCCATTGATTGAGAAGTTGGCTTTCAGTGAACTCGTTGACCCTCGTCTTGGGGAATCATATGACACAGATGAATTATACGTCATGGCCAAAGCAGCATACTTTTGTGTCCAAAGAAACCCCGCGAGGAGACCTTCCATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAACCTGTCCACCTGGCCATTATGAGAGATAAATTTGAACCAGGCTGTTTCAAAGATTGGAAGTGGGCTGAGTTGAGTGGGATTCCAACGTCGAAAGCCCCCCCTGTTTACGCAGCATGTAAAGGTGTAATTTGGGTGAGGTAG	1986	0.4486	MEDGRFPAISANEEYPENMSFECSGRSVQSTGRERERIEENEASALESLDNPDTHSYVVIAWDATKDRSENDIKLMVDNVRNKSGILSAGHKLLVLGLLYKVPHPMGYQTLACPESFAGTNLRAMEDEVRRKVEAYASMLLPTFQVCQKEGVSIEVKVAAGFPVKLVILQEIAHYNADWIILDRHLRRDLRYHLNKIPCKVALARDDFTVETWRSHHSREADFTDHKPVYSLSRVVSLSDAHNFEDPQHSVLHGTSDFLEVLAKHSNASSSRDNISSSHFGSSSKQEKSGISPKGESKQNKYGLLPKSSDFPILCAGCGIRTELCAKESMRFSYSDIQKATNNFSNDNLLGEGGYGHVYKGVLRNGQQIAAKVRKEESRQGFSEFNSEIYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLHWHLYDKNAEVLEWHQRYGVAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWEMDDETLRTRIMGTLGYLAPEYAEDGIVSVRTDVYAYGVVLLQLISGRKVVNDNHLPQISLRQWAEPLIEKLAFSELVDPRLGESYDTDELYVMAKAAYFCVQRNPARRPSMGEVVRLLEGEPVHLAIMRDKFEPGCFKDWKWAELSGIPTSKAPPVYAACKGVIWVR	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2732	661	SUPERFAMILY	Protein kinase-like (PK-like)	329	616	IPR011009	-
	Alju07g2732	661	CDD	STKc_IRAK	350	614	-	-
	Alju07g2732	661	Gene3D	Transferase(Phosphotransferase) domain 1	421	620	-	-
	Alju07g2732	661	ProSitePatterns	Protein kinases ATP-binding region signature.	350	372	IPR017441	GO:0005524
	Alju07g2732	661	CDD	USP_Like	114	204	-	-
	Alju07g2732	661	MobiDBLite	consensus disorder prediction	269	302	-	-
	Alju07g2732	661	Gene3D	Phosphorylase Kinase; domain 1	318	419	-	-
	Alju07g2732	661	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	316	419	-	-
	Alju07g2732	661	ProSiteProfiles	Protein kinase domain profile.	344	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g2732	661	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	465	477	IPR008266	GO:0004672\|GO:0006468
	Alju07g2732	661	FunFam	Lectin-domain containing receptor kinase A4.3	420	631	-	-
	Alju07g2732	661	MobiDBLite	consensus disorder prediction	269	296	-	-
	Alju07g2732	661	Pfam	Protein kinase domain	345	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g2732	661	PANTHER	OS01G0750732 PROTEIN	264	614	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g2732	Alju-ChrAlju07	52795218	52801615	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g2732	332	613	Trihelix Transcription Factor Family	AT5G38560	47.586	2.90e-82	272

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Alju07g2732		Pkinase	6.7e-39	CL0016