Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2720 ATGCTTGCGGAATACCCAGTCCCAATGCAATGCCTTTCATGTGAGGAATATTACGGCCTAGGAGATGTCGGCACCTGCAAAGAGTGCTACAAAGAAGCCAACGAGACTAAGGAGGAGCTCAAGACTGAGATCGACTCCTTGAAGGCCAAAGTTGCCTTCCTCAGCCTCTTGTCTCCTGTTGATAACCATAATCCCTTCGATACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTACCCTCCCTGACTGTTCCGGCTCACAAGGTTGTTCTGGCGAGTCGGTCCCCGGTGTTCAGAGCAATGCTTGAAAATGATATGGAGGAAAGACGAAGTGGTACCATAAAGATTAGTGGTGTATCATACGATGCTCTTCGTGCCTTCGTTGATTATTTATACACTGCAGAAGCATGCCTTGATGATCAAATGGCCTGTGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCATGTTGTGAAAAATATCTGATGGCTCGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTTGCTCACCAATACAATGCCAAACAATTGCTAGATGCGGCCTTGGCATTAATCACAGACAACATGGACAAGCTTTCTAAGCATGAGGAGTATGAGGATCTGGTGGAGAGTAACCCTCGGATTGTGGTTGAAATCTATGAAGCCTATCTCTCAAAACAGGTTAATACCGCAGCCAGAAAGAAATCTTCAAATAAGAAATAG 747 0.4485 MLAEYPVPMQCLSCEEYYGLGDVGTCKECYKEANETKEELKTEIDSLKAKVAFLSLLSPVDNHNPFDTDVILVPSDESSDLPSLTVPAHKVVLASRSPVFRAMLENDMEERRSGTIKISGVSYDALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKACCEKYLMARLNWEKAVANYAFAHQYNAKQLLDAALALITDNMDKLSKHEEYEDLVESNPRIVVEIYEAYLSKQVNTAARKKSSNKK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2720 248 Coils Coil 30 57 - -
Alju07g2720 248 Pfam BTB/POZ domain 68 169 IPR000210 GO:0005515
Alju07g2720 248 PANTHER SPECKLE-TYPE POZ PROTEIN 41 241 - -
Alju07g2720 248 FunFam BTB/POZ domain-containing protein 174 247 - -
Alju07g2720 248 SUPERFAMILY POZ domain 64 169 IPR011333 -
Alju07g2720 248 CDD BTB_POZ_ZBTB_KLHL-like 68 155 - -
Alju07g2720 248 Gene3D - 173 248 - -
Alju07g2720 248 SMART BTB_4 68 172 IPR000210 GO:0005515
Alju07g2720 248 ProSiteProfiles BTB domain profile. 68 142 IPR000210 GO:0005515
Alju07g2720 248 CDD BACK 181 216 - -
Alju07g2720 248 Gene3D Potassium Channel Kv1.1; Chain A 34 172 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2720 Alju-ChrAlju07 52702616 52704963 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju07g2720 BTB 1.2e-22 CL0033