Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2715 ATGGATCATCCCTCCCATTCCCATAACCAGCACCAGCATGCAAGGTACGCTCCTCTTCCCCCTCATCACCCGCGCCACTCACAGTTCCCAGAAGATCCCCGTTTCCGTCCTCACCACCTTCCACCGCCGCCGTCGGCACCAACTCTTCCACCCCTACCCCCTCCTCCGTCTCTTTCCTTTCGAAACATCCGCACCCCTCCCCCATCGCATCCTCCCCCATATAATCCTCCTCATCAATCCCAGTTTTCTTTCAACGGCCCGAACTATGCCCACCGTCCAGTTGAAGAGGATCGCGCCGTATCTGCTAGCCACCCTCATGATTTTACGCACTCGCAGAGGGTTTCAAATCGGATGATTATTGAGAATGATCGTCCTCGCCAAAGTCTCCCTGATTTCGACTATCGCAGTACCGATAACCGCATCGGTGGTTGGAACCCACCGAGGGTTTTGTCAGATAATCGGCCGTCGAGGCCTTACCCTCCCTTAGACTTCGACCGGGAATTGCATCATCAGCGCCCATTGAATCACAAAATAGCGCCGCCGTATCCGCCAACTGATAGAGTTAGGTGTAATTCAGAGGGCAACTCTAGGGGAAGAGTTGATCACATTGATGGGTACGAAGCCAAGACCAGAGAAGAGTTTGCATGGGGTAGAGGTGATGAGAAATACCTTCGCCGCAGGGATTTTGGATCAAATCTTAACGCATCTTCTGGAGACTTCGGAATCATGTCTAGTCAGAGTACATTATCAAGGGATCTTGACTCGAATAATGGGGATTATGTGCTTTACGGCTTGGAACGGGACAATGAAATATCTAGGGGTACTAGAAGAGATGGGCTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGGCTCCAGAGACCCACATAATTCATCTTTTGAATTGGGAAACAACGAGAATGGTGGCGATGGTATTAGGGTAACGTCCGGGAAGTATTATGGTTCGGAATTGGGTAGATATAATAATAGAGGAAACAGAGAATCTGGTCATGAATTTAGTCGTGCTCCAAAGAAGCAAATTCAGAAAAAGAGCGCACTTCTTAGAATTCAAATGGTAAAACCAAATCACAAGAACCGTGAGATTGAACAGTTACAATATACCAGTTATGGTGATGACTCAAGCTCTAGTTCCTTTAGAGGCAAAGATCAATTTGAATATTCAGGTTTTGGGGTCAAAGCAGAAGAGAGAGAAAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGTAGATATCACCTCTGTTTCTGATACAGATGTTGCTCCTGCAGAAAAGGGGAAAAACGGTTTGGCCTCTGACAGCGATTCTCCTGATTTAAAACCTGCCAAACCATCTATGGCTGCTGTAAACTTAGTTGGCTCACCTTGCAAGGTGAATCTCATCCCTAGTTCCAACAAGGAACTTAACTTACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCTTTGTGCTAGTGTAGCTACTAATTGTCATGTGAAAAATGTGGGTGCTCAAACCCCGAAGGGAATTGTTTCTCATGAAATTACCAACCCTTGCTCTGTTAAAACATCTCCAAGGGTTGCTCCCAGGGTTTCCAAGAAGAAAAAAATTGTAAAGAAAGTGGTGAAGAAAGTTACTTTGAATCCTAATTTAAATGTCTCAAGTTCCATGTCATCAAATATGTCTAATGGAACTGTGAAAGCTGATCGCATTGGTCCTTCATCTACATCTGAATCTGATAAAACTTCTTTAAATGAGAAAATCACTGCTGTCGACATGGTGTCCTTGCCAGATAATTTGCTGTCCTCCCCAGAGGAAGGACAATTGCTGCCTGATAATAGTAAGGAAGATGTACCTTTGCTTAGTACAGGGTCACATACCAGTTCACAAAAGCATGAGGCTGATGATAACCCTGTTATAGGGCAAGTAGATAGAATTGAAAGAAGTGAAAACATTTCTAATTCCTCATTGGGTGCTTTTAGCATTGAAGATGAAAAGAATGATTCTGATTGTCCGAATGCAGATGATTTTGTCCATGGCTTGCATAGTATTCTAAGTACTGATGAGGCTTCTAAGGCTAAGTCACCGAATGGAATTACATTTGCTGATATTAGTAACAAGGATGATGTTAATATTCAACTTTGTCAGAATGAAGTGGCCCTATCACCTCAGCAGTATTCAAATGTACAATATTTAGATGATCAGTTTCAGGTAGAAGATGATAAGAACAGTAGACTGTCAACATCGGGTGAGAGTGTAATAAACACAGATGTTATAAACACATGTAATTCTGCCAATGTTAGTCTGGATTGCTTGTATTCTAATGATCTTACTGGTAATGCACAAAAGAACATTACAGTTTCTGACTTTGGAAATGATGGCAAGGTAGATTGCAAAACTAAAGCCCTACCATTATCTGACAGTATTATTTTGGAAGAAAACCCAGAGACTTGCTCCCCTGTACCAAACTGTGGAATGTTTAGTCTTTCTAGTTCTGCGGAAACTAGGATTTCAGATGGTCAAGAATGCCCAAAAAATGCAAGAGTACCCATGCATCTTTCTGACAACAGCCGCATTAATTCAGAAGAGAATATCATGGTTCCCCATTGTGTTATTGTTAAAGATTCTGGAAAGGAGGCATCCCCTGTTGATGTCAATGCATCTCCTGAGAATTGTACCACAGAACAGTCTCCAAATGCTAATTTTTTGGTTAGGTTTGCTGAAGGAGATACAAATATGTCTAAAAAAAGAAAAGTTGAGACACATCTAAATTTTTCAAGTTCAGATACTGGGAGCATATCTCCAGACCCTATACATACAGTTAGCCTTGCAAATGTGCATACAACCTTAAGTCTGTTGAAGGATTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCAAAGCTCAGATATTTGCTTACCATCCATTACAGGTGAGATTACTGTTTTAGATGGGAAAGGGGAGGTTTCAGAGACCCAAGTTTACTTTGGAAATAGCGGCAGTAACAGTGCAGATAGGGCTTCACCATGGTCTAGAATAAATGAAGTCACTACTAGTCACATGAATGTCAATTCATTGCAAGCTGAACTTTCTGATGCAATTGTGGTTGCCACATCTTGTGCACAAGTTCCTATTAGTATTAGTGATAACAACACACACCAGGAAGCGGATGCACTTTCAAGCATGGTTAAACCTTCTGCTTCTCTATCCCTGGCTTATCCTGAGAGTAGTGCGAAATTGTACATCAATAGTTCGTCTGGAGGATCTGTTGAGTCTGTGGACGCAAATACAAATATTACAAAGTTTGAATGCTCCCAATTGCAGCACCCAGCCATCAACTGTCATTCACTTGGGGATTTGACTTTTTCAACCAATCAGTTTCCAGTGCTGGAAAATGAGCAGAAAGAAAATTCTCTTCCAGTTGTGCCTATAAACAACATTCAGAAAGACATTCTGGTTTCTGGAAACACTGAGATAGAGAGGATTGATATGCAGGATATTGAAAAATGTGAGTCCAGAGAATTTGTAAAAAGATCTCCAAGTACTGATTTGGAATCCAGTGATCCTCAAACAAAGGATGATTCACCTCTTGAACATCAATATCTGTCCTTCCCAGCTGATACTGAGGCTGTAACAACAAGTGACTGCAGTACAGTATCAGATATACTTTCTCCGGGGACCATGCCTGACATACTTGATAGTAGGACTTCAGATTGTCAAGCAATCCAAAATGAAAGCATTCATGGAGATGAAGATAATGCGGATAGCATATCTAAGGTTGAACAGGATTGTGACTTATTGGCTTCTACATCATATTCACAGTATACTACAAAAAAGAATGTAAAATTAAGTCCTGCAACCAGACATGATAACTTGATTACAGGGAAGATGATGCCTCAACCTTTGCAAGTTGATTCCAAAGTTATGACTCAAGGACTGAATTCTTCTTGTTCAGAGTTAAGTTGTGGCAAAAATCACTTGGGTTCTGCCATTCCTACTACTTTCCAAGGCCGATCCTACTTAAATTTTCCCAAGTCAAAGACATCTGCATATTCAACCCAGGTTTCAAATCTTCGAACATGGCATCGTACAGGTAATAATTCTGGTTCTCTACCAGGAAACAAGCCTTCGGCAGGATCTGTGCCTACCAGAAGGTCAATTTCAGAAAAGAAAGGGAACTTTCAAAATACTTCTTACATTCGTAAAGGTAACAACAGTATTGTAAGGAATCATACTTCTGTTTCTGCTTCACCACAATCCTCAGCTAATCAGTCTTCTTTGGGGTTTGAAGAATTTCAAAAGAGCACTGGATCTGAAATTATGGTTGAAATCTCAAATCACGCCAATCTCTTGAAAACAGGATTGACATACGCTCCTCTGGAGAGGCAAAGAACACCTCCGCTACCTGTTGACGCTAAATTACCTGATCATATGGCAACAGCGTGTGAGGAAAATAAATCTTCCCCATTAATAGAACCCCGTTCCAATGCTTTCCGTGATAGTGCATCTGAATCTGAACCTAGAAACTTTACAGAGCCTTGTGATGCTCCAAACTCTGCTGATGATGCACTTAACTTGGATAAAACTGTTGAAAATCTAACTGCTCCATCAAACAATGTGGAAAGTCAAGTTGAAGCACATGATGAGAATGTGTCTTTGAATTCGAAGAGAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCCAATTCTTGTGAACTTTCTGCTGCTACTGATGATAATGTCCAGATGGCCTCTTCTGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCATATCAACCAGACAGTTGCAATGCCCACTGTAAACTCTGATGGGCACAGGGCCCGTGAGGCTAGCTGCAACAGGAGGTTTGGTAAGAGGCGGTCACTGAAGGTTGTTGGAAGGTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGTGCAAGTTCATCCAGAAAGGACAATGACTCTCTGCATCATCAGAAGCTTCTGCCTTACTTGTTTCCATGGAAAAGAGCAACATATTTAAGGAGTTTCATTTATAGTCCTGCTTTGAGCTCCAATGCCAATTCATTATCTGCGATCAGCAAGAAATTGGTTCTCTCGAGAAAGAGGGATACTGTTTATACTAGGTCAACCCATGGATTTTCCCTTCGGAAATCCAAGGTGGTAGGCCTTGGTGGATATAGTCTAAAATGGTCAAAATCAATTGAGAAGTCTTCAAAGAAAGCTAACGAGGAAGCCACACTTGCAGTTGCTGCTGTGGAGAAGAAAAAGAGGGAACGGACAGATGTTGCTAGTATCAGTTCTCGGGCAAAGAGAGAACGTATCTTTCGTATTGGGCCAGTTCGTTACAGAATGGACTCTTCAGGGAGGACACTTCAAAGGATTTCAGATGATGAGTCCCTGGCCTCTGCTTCACTCCGTTCAGGTTTGCATTTGAAAAGTTCATACATACCAAGGAGATTGGTGATTGGAAATGATGAATATGTTCGAATTGGCAATGGCCATCAGCTTATCAGAGACCCAAAGAAGCGAACCCGTTTATTGGCTAATGAAAAAATTAGATGGAGTTTACACACAGCAAGACAACGATTGGCTCGAAAGCAGAAGTATTGTCAATTCTTTACTAGATTCGGGGAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCACGATCCCTCAAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCCACTCCCATCTGCAAATTGACTCACAAGATTATTCCCGAGAGAATGCCTGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCCTATAGACATGTTAATGTGAACCCTAAAGCATCTGTTTGCGAAGGATTTCTCCGGGGATATTGTGCCGATGGCAATGAGTGTCGGAAGAAGCACACCTATGTTTGTCCTACTTTTGAAGCAACAGGAATCTGCACCCAAGGGACCAAATGCAAACTTCATCACCCCCAAAAACAAGGCAAGGGAAAGAAACGGAGGAGATCGGTAGATCAGAGGAACTGTAAAAGGAGGAGATACTTTGGTTCGTTAAGGATTGATGTTTCTGAACCTGGGACGATGGTTGCGGCTCCAAGGCAAGGGGAGCAGAGTAAGAATGACCTTGAAGGAGAACTTGCTGACTATATCAGTCTCGACGTCGACGATGAAGATGGTGCAGAACTAGCCGAACAAGCAAGCGAGCAATCAACATTGTGTGATAGTGAACCTGTAGATATAGTATTGGATGATGAGGATGAACTCATTAGGCCTGTTCTGATAATGAAAAAGGATATTTAG 6414 0.4199 MDHPSHSHNQHQHARYAPLPPHHPRHSQFPEDPRFRPHHLPPPPSAPTLPPLPPPPSLSFRNIRTPPPSHPPPYNPPHQSQFSFNGPNYAHRPVEEDRAVSASHPHDFTHSQRVSNRMIIENDRPRQSLPDFDYRSTDNRIGGWNPPRVLSDNRPSRPYPPLDFDRELHHQRPLNHKIAPPYPPTDRVRCNSEGNSRGRVDHIDGYEAKTREEFAWGRGDEKYLRRRDFGSNLNASSGDFGIMSSQSTLSRDLDSNNGDYVLYGLERDNEISRGTRRDGLGDSKRWVNDRKGSRDPHNSSFELGNNENGGDGIRVTSGKYYGSELGRYNNRGNRESGHEFSRAPKKQIQKKSALLRIQMVKPNHKNREIEQLQYTSYGDDSSSSSFRGKDQFEYSGFGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAVSDVDITSVSDTDVAPAEKGKNGLASDSDSPDLKPAKPSMAAVNLVGSPCKVNLIPSSNKELNLQKKVSDSCSQLCASVATNCHVKNVGAQTPKGIVSHEITNPCSVKTSPRVAPRVSKKKKIVKKVVKKVTLNPNLNVSSSMSSNMSNGTVKADRIGPSSTSESDKTSLNEKITAVDMVSLPDNLLSSPEEGQLLPDNSKEDVPLLSTGSHTSSQKHEADDNPVIGQVDRIERSENISNSSLGAFSIEDEKNDSDCPNADDFVHGLHSILSTDEASKAKSPNGITFADISNKDDVNIQLCQNEVALSPQQYSNVQYLDDQFQVEDDKNSRLSTSGESVINTDVINTCNSANVSLDCLYSNDLTGNAQKNITVSDFGNDGKVDCKTKALPLSDSIILEENPETCSPVPNCGMFSLSSSAETRISDGQECPKNARVPMHLSDNSRINSEENIMVPHCVIVKDSGKEASPVDVNASPENCTTEQSPNANFLVRFAEGDTNMSKKRKVETHLNFSSSDTGSISPDPIHTVSLANVHTTLSLLKDSSVSEVLNPYVQSSDICLPSITGEITVLDGKGEVSETQVYFGNSGSNSADRASPWSRINEVTTSHMNVNSLQAELSDAIVVATSCAQVPISISDNNTHQEADALSSMVKPSASLSLAYPESSAKLYINSSSGGSVESVDANTNITKFECSQLQHPAINCHSLGDLTFSTNQFPVLENEQKENSLPVVPINNIQKDILVSGNTEIERIDMQDIEKCESREFVKRSPSTDLESSDPQTKDDSPLEHQYLSFPADTEAVTTSDCSTVSDILSPGTMPDILDSRTSDCQAIQNESIHGDEDNADSISKVEQDCDLLASTSYSQYTTKKNVKLSPATRHDNLITGKMMPQPLQVDSKVMTQGLNSSCSELSCGKNHLGSAIPTTFQGRSYLNFPKSKTSAYSTQVSNLRTWHRTGNNSGSLPGNKPSAGSVPTRRSISEKKGNFQNTSYIRKGNNSIVRNHTSVSASPQSSANQSSLGFEEFQKSTGSEIMVEISNHANLLKTGLTYAPLERQRTPPLPVDAKLPDHMATACEENKSSPLIEPRSNAFRDSASESEPRNFTEPCDAPNSADDALNLDKTVENLTAPSNNVESQVEAHDENVSLNSKRIVYVKRKSNQLVATSNSCELSAATDDNVQMASSDGYYKRSKNQLVRTTFESHINQTVAMPTVNSDGHRAREASCNRRFGKRRSLKVVGRSCKPLRASLVWTLCGASSSRKDNDSLHHQKLLPYLFPWKRATYLRSFIYSPALSSNANSLSAISKKLVLSRKRDTVYTRSTHGFSLRKSKVVGLGGYSLKWSKSIEKSSKKANEEATLAVAAVEKKKRERTDVASISSRAKRERIFRIGPVRYRMDSSGRTLQRISDDESLASASLRSGLHLKSSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRTRLLANEKIRWSLHTARQRLARKQKYCQFFTRFGECNKDDRKCPYIHDPSKIAVCTKFLNGLCSTPICKLTHKIIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLRGYCADGNECRKKHTYVCPTFEATGICTQGTKCKLHHPQKQGKGKKRRRSVDQRNCKRRRYFGSLRIDVSEPGTMVAAPRQGEQSKNDLEGELADYISLDVDDEDGAELAEQASEQSTLCDSEPVDIVLDDEDELIRPVLIMKKDI 2137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2715 2137 Gene3D - 1982 2044 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 272 297 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 616 670 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 117 133 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1191 1216 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1507 1526 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 331 346 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1 156 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 369 387 - -
Alju07g2715 2137 Gene3D - 1926 1981 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 444 468 - -
Alju07g2715 2137 SMART c3hfinal6 1899 1927 IPR000571 GO:0046872
Alju07g2715 2137 SMART c3hfinal6 1928 1952 IPR000571 GO:0046872
Alju07g2715 2137 SMART c3hfinal6 1981 2007 IPR000571 GO:0046872
Alju07g2715 2137 SMART c3hfinal6 1954 1979 IPR000571 GO:0046872
Alju07g2715 2137 SMART c3hfinal6 2008 2030 IPR000571 GO:0046872
Alju07g2715 2137 FunFam Zinc finger CCCH domain-containing protein 7 1982 2043 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 39 78 - -
Alju07g2715 2137 FunFam zinc finger CCCH domain-containing protein 3 1929 1980 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 569 604 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1501 1539 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 647 661 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1379 1403 - -
Alju07g2715 2137 ProSiteProfiles Zinc finger C3H1-type profile. 1981 2008 IPR000571 GO:0046872
Alju07g2715 2137 ProSiteProfiles Zinc finger C3H1-type profile. 1954 1980 IPR000571 GO:0046872
Alju07g2715 2137 MobiDBLite consensus disorder prediction 361 387 - -
Alju07g2715 2137 PANTHER CCCH ZINGC FINGER 334 2136 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 298 312 - -
Alju07g2715 2137 ProSiteProfiles Zinc finger C3H1-type profile. 1899 1928 IPR000571 GO:0046872
Alju07g2715 2137 MobiDBLite consensus disorder prediction 272 348 - -
Alju07g2715 2137 MobiDBLite consensus disorder prediction 1191 1213 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2715 1905 2030 C2H2 Transcription Factor Family AT2G32930 32.117 5.44e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju07g2715 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2715 07 52672115 52680639 Alju07g2715 07 52672115 52680639 ECH