Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2712 ATGGGCTCGTGTGGGAAATCAAGTATACTAGATGACGCCTCAAGCGGGTCTGTTATTGAACAGCAATCATGCGCAGAATTTCCATCGCAGTCTATTCCTTTGCAGCGGTCCTGTCCAGTAGTAACTTGCAATGCATTGGACTCTAATGTCCAGCGCTCCCATACGATGGAGGGATGTATGAATTCGTCTAGAGAGGTCCACACTGGCTCTGCAAGCACCATTGATGTTCCAGAGATGTCCAGAGATTCATCGTCGATGGTGAACAAAAATGAAAGTACTGAGAGGTTACAATGCTCATGTACAGTAGTAACTTGCAATGCGGTGGACTCTAATGTTGAGCACTCCAATATGATGATGGAAGGTTGTATGGATTCGTCCGGAGAGGTCCACACCGGGTCTTCAAGCTCCATTGGTGTTCCAGAGATGTCCAGAGATTTATTGTTGATGGCGGACAAAAGTGAATATACTGACAATTTACAACGGTCCTGTCCAATAGTTACTAGCAATGTGCTGGACTCTAATGTTGAGCATTCCGATATGATGGAATGTTGTATGAATTCATCTAGAGAGGTCCACACAGGGTCTGCAAGCCCCGTTGGTGTTACAGAGGTGCCCAAAGATTCATTGGTGGTGGTGGATAAAAATGAAAATACTGGTACGCTAGAAGAGTTCTGTCCAGTAGTAACTTGCAATGTGTTGGACCCTAATGTTGATCACTCCAATATGATGGAAGGTTGTGTGAATTTGTCTAGAGAGGTCCGCTCTGGGCCTGCAAGCCCCATTGATGCTTCAGAGATAACCAGAAATTCATTGATCGAGAACAAAAGTGAAAATACTGATATTTTACAACAGTCCTGTCTAGTAGCTACTAGCAATGCGTTGGACTCTAATGTTGAGCACTCCAACCTGATGGAAGGTTGTATGAATTCAACTAGAGAGGTGGCAAGCTCCATTGATACTCCAGAGGTAATCAGAGATTCATTGTTGATGGAGAACAAAAGTGAAAATACTGATATTTTACAACAGTCCTGTCGAGTAGTAACTTGCAATGAGTTGGACTCTAATGTTGAGCACTCCAACATGATGGAAGGTTGTATGAATTCATCGAGAGAGGTCCATACAGGGCCTGCAAGCCCTATTGATGTTTCTGAGATGTCGGAAGATTCATTGTTGACAGTGAATAAGAGTGAAACTGAATTGTCACTTTTGAAGAAAACCTCAGAGAGTGATAGCCAGACTTGTCCAAGTGTATTATGTGCGCAAATTAAACTTTCTAATATAGAGATTGTCAGGTTGGTCTCAGAAGGAAAACATTGTGCCAAAGATGGCCTCAAAACGCCATCAGACTTCATACCGACCACTGGTTCTCCTAAGGATTGTGTTCATCAGGATGGGCACAAGGATGAGAAGAGCAACATATTCCACTCTGCTGGAGTTTCTTTAGCACTCATGGAAGGTGAAAATGATGCTGGTTTACCAACAGGCTTTGTAGTTTATTGCCACCAGCAAAGCAAACAAGAGGATACAATGAGGAATGCTAATCCATTGTTGAAGGGCGTGAAAGGAGGTGATTTGATTTGTGGGACTGAAGCAGGTGCCTGCAAGCAGACTCATTCACAGGACAGTGAAGTACCGACAGATGTTATATATACTGAAGCAGAGGCCACAAGTGATCAGCTGCATGATCAGAAAGATAGTGGTGATGAGAATAGTCCTTGTGAAGATTTTGTTGATAAAGAAAGTATCATTGATGCACATGTCCAAGCATTTTCCTCACAAGGCCATCAAAGGATCTTGGGGAGTTTGCCTGTAGCTTATTCACCTGGCGAGGCTACTCACTCAGAGAAGGGGATTGATAATATTAATAATGATTTTGATGCAGAAGATGTGAAAATTATGGGAAAAAATACTGATGTTATGACTGAAATAAATGTTGAAATGAAGAATAATATGCCACAAGATGACAACGCATGTAAGTTAAATGAAAGTTCCTCAACAACAGATGCCAACTGTACCCTGAGAAAAACGTTTCCTCCTGAATCAGATCTTCCTTCTGTTGACCATATCAGTATTAGCTCTCCAAAGGACGTATCTGATCTTCTCAAGGAGGCCAATGGTTCCACCAATAGTGGCCTTGTGGGCGATTCTGGAGAGGCAGACAGTATTAGGAAAGATATTATACAAGTTGATTGTACCTCTGAAAGCAATTATTCTGGTAATGCATCCTTGCCTATTCGAAGGAATAGTCGAAGAAGTAAATCTGGTCATAAGGCGCAGACCAAAAGGGCTTCAAGGAAATGCAAGAACAAAACCTGTGTGCCACTCCTAGGTGGGGATATGAAGATAATCTTGGAGGCTGCTAGAAAGAAAAGGAGCTGTTTCTCTAAACCAGCTCGTTCTTCTATCTGGGGATTGGTAGGAAACATTAATAAGTTTTTTGAACAAGATAATGAGCTTGGAGTTGATGAAGTTATGTGTCAAGGATTGGGGAGGGTGGGAGGTGCCTTTAAAAGTGGCACGAGAAACAAGAATGGTTCTATTTCTAGCTCATTGAGTTCAATGAAGAAATGCTGTGCTTCAACTACTCGTGTTCGTCTGAAGATTAAGCTGGGGAAAGAAGTTCATTTAAGTTGTTCAGATGTCTTGGTTCCCGAGGTTATGAACAGTGTATGTTCTGCTTCTAATGTGGGCCCTGGTTCAGGCTTTCAAGAAAAAAACAGAAGTGCTGGAGATAAATGTTCAGAAGAGGTTGCAGAAGGGAAGTCTGAATCTTTGACAAACAACCTGGATGAGGATGCTCTTTATCTGAATGGACAAATGGCAAATCACCACTTAGAAGCTGCTGCAACAACAGAAAAGTCAAATGAGGTTGCAGAGGAAGCATGTCATATGATTCCTCCAGAGAGGATGATTGAAACGTTGAGAGAGACTGTTAATGATAAGGGGATGGATCCTGGAACTTCGCCTGATTCAGAAGTTATAAATTCAATTCCTGAAGTCCATGTTGGAGAAAGACATCAACAAGGGTTGCATGATGCTTTTCTTGGTTCTTCTAAAGTGTCTGATTCTTTTGGAGGGGTATCTGGTTGCAGGAGAAGGAAGAAGAAAGACAAAGTTACTTCTTCAAGTAGTTCTATTGTAGAAGATGGCTCAAAAGGGCCTCCAAGGAAAAGCAAAACTAAGCAATCAAAGAGTCATGGACGTAAAAAGAATTCCAATGATGTGGTTTGCTCCATGAGTTTGCATACTTCCACTGGTATAAATACTGTGAGCTACTCAATATGCCATAAAGAATTATCCAGTGAATCATTGCCCCCATCTGGAGAGATTGAACTTGAAGACTCCACTGAGGCTTTGAAAGTCAAAAGTAGCATGAAAGTTGAGACTACTTGCAGCCCAAATGACAATTATGAGCTTTTGGAATCCCAGGGAATTGATAATTTGCTGCCTTCAGCAAGATCCTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCATCACCCCCAAATCAAAAGCTTCTGACTCAATGAGCCTGAAAAAGACTGGCAGCAGACGTAGGGAGAAACAGCTCAAACCTATTAAGAAGAGTGAAGTCAAGGGAAAAGCTGTCTCTGCAAAAGTTATCTCTGAAGCAGAAGATTGTCTGCATGCAGAACATGTTGATGGAAGTTATCAATTGGATGATATTCAAAAAATGAATGCTGGTGACAACAAAGTATCAGTAAATGGATCCAATTTGGACATGGCAGTTGGTACTGGTTTGGAGCAGCAGCATCCATCACCTCATAATGCATGGGTGCGCTGTGATGATTGTCACAAGTGGCGGCGTATTCCTGTTGAGCTCGCGGATCTAATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAATGATAAAGCCTTTTCTGATTGCTCAATCCCCCAAGAAAAGTCGAATGCAGAGATCAATGCGGAATTGGGATTATCAGACGCATCAGGTGATGAAGATGCTCATGAAGGCTGTAAAAATTATAAGAAGTTGGAATATCAACACCCAACAGTTCACCAGGAGTCAACTTTTACCCATATTCTTACTAATGAGTTTCTGCACCGCAGCGGCAAAATGCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACCAACGTCAGAAGGTAGGTTTGGTTGTGGGGATGAATGCCTAAATCGGATGCTCAACATTGAATGTGTTCAAGGAACCTGCCCATGTGGGGATCTTTGTTCAAATCAGCAGTTCCAGCAACGCAAGTATGCCTGCTTGACCTGGTTTAAATGTGGGAAAAAAGGTTACGGGTTGAAGGCAATTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACCTTAAATGGCAGCGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGCCGTACAGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCGTTGAGGGATATAAAACAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAAGTCATTGTACAAGGCGATTCAGATGAAGAATTTCCAGAACCAGTTATGCTTACTGAAGATGGTGAAATTGAAGGCAGTATGCCTGAATCTGATGTTATGCAGGCTGAAAGGAATTTGTCAAAAGACACAAGTCTAGTTGATAAGTCCAGAAGTTCTCAAGTTCCAGGTAATAATCAGGAGAAAGAGAACTCTATAAACCCATCTCCTGCTATTCCACCGTTGCACTGCCCATTAGATGAGGAAGATTCCATGGGCAAATTGCCATTATCTGACGTGGAAGAAATTTCTCCACAAATGGGGGATGCAGTGAGTAAATCAATGCCTGATGTACAACATGTGTTGAAATCAGAGCTTCCTGATGATATTTCTTCCATCCAAAGAATGGAGGCTTCTGCCACACCTATTAGTAAAGTGATATCAAATTTGATTAAGAATAAAAGGGAATCCAAGTCTGAAACAGTTGAAGATAGGCCTGGTTTTCCAAAAACTCATCTGCTTGTGAAAACTTCTCGAGCAAATGGTTCAGTTAAAAAGGGAAAGGTTCATGCTAATCATTCAAATGGCCTCAAAGCTGCGGTAACAGCCAACAGATTGCAGGCAGCACCAATCAAACCTAAAAAGGTGGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAAGATGGAGAAGGAGGAATAAGCAAAAGAAAGGATGCAACCAAAGGCTACTTAAAGCTTCTGCTTCTCACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGTGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAGAATGGTCTGCAGATGTTGCATAACATTATGAAGCAGTACAGACGAGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCAAGCAAGATTTTGACATTTGAACACATTAATGGCGGCCCCCCTTGTCATGGAATGGAGAGCTTTAGGGAGTCTATGTTGTCTCTGACGGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTTCGGGACAGATGGATTCGTAAACCTTTCAGAAGACATGGCTATGGGGACCGAGATGATTGTAAGGGAGAATCTCAAAGGAATTTTAACTGCAATAGATTTTCAGCATCACAGAACCATAGGCGGGAGCTAGATGTTAGATCCACAGAAGCTATAGATTGTGTCCAGCAATCAAAACTTGTGACAACTTCGGTAGATGCTGGTGTCCAGGAGGACTGCTCTGCACTGTCTTTAGACGGTGGTAAAGTTAATGGGACAAAAAGGCGCAAGCGTAAGAGCAGATGGGATCAACCTGCAGAAACCATTTCAAATTCACCATCTAGTCCATCTAAGAAACAAAATGTTGATTCTGGGCTATCAATGCATGCTGATGCAGCTATTGACTCTTTCGATGGAAGTCAAAACATTAATGAGGATTTCCCCCCGGGTTTTTCATGTCCTGTTCAACCTCAATTGCCTTCTTCAAATGCTTTGCCTCACCCTGTTGATCTTGCTTTGCAAAATGTGAGCAATTCTGAGTGCCCCCCAGATACAGTAATTGGACATCCAAAGCAGAAATTTAATTCTTGCATGCCTGTCTCGTACGGAATGCCATTATCTTTTGTCCAGCAGTTTGGCACACCCCATGCTGAAATATCGGGGAGTTGCCTCACTGCTCCAGGCGTGCCTTTCAGCCCATTTCCTCCATTGCCCTGCTATCCGCAGGATAATAAAGATTGTCAACCTTCTAGCTCTACTAATGCAGCAGCTGTAAATAAGCCTGTTGAAGTTCAGCAACGGGATATGAATGGTCCAGTTGGTTGTTGCTCTGATGATATTACTCCAAGCACAACTGACACTAGCCCTAAAGACATTGACCTTCCACATGAAGATGATAAACAACTTTATAAACGTTTGAAAGGTTCCTCTTGTGATTTAGGAAGGAAGTACTTTAGGCAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTCAGGAGGAATGCATGGGGATCTAATGGGAATTACACTGCTGGAGGTATATGTAGTGTAAGTGTAGGAGATGAACCAAGTGAGTCAAAAGTTGCATTTTCTTTAGAGGATGTAATATGTAGAGCAGAGGAAGGTGACAATAATGTTTTATAA 6969 0.4191 MGSCGKSSILDDASSGSVIEQQSCAEFPSQSIPLQRSCPVVTCNALDSNVQRSHTMEGCMNSSREVHTGSASTIDVPEMSRDSSSMVNKNESTERLQCSCTVVTCNAVDSNVEHSNMMMEGCMDSSGEVHTGSSSSIGVPEMSRDLLLMADKSEYTDNLQRSCPIVTSNVLDSNVEHSDMMECCMNSSREVHTGSASPVGVTEVPKDSLVVVDKNENTGTLEEFCPVVTCNVLDPNVDHSNMMEGCVNLSREVRSGPASPIDASEITRNSLIENKSENTDILQQSCLVATSNALDSNVEHSNLMEGCMNSTREVASSIDTPEVIRDSLLMENKSENTDILQQSCRVVTCNELDSNVEHSNMMEGCMNSSREVHTGPASPIDVSEMSEDSLLTVNKSETELSLLKKTSESDSQTCPSVLCAQIKLSNIEIVRLVSEGKHCAKDGLKTPSDFIPTTGSPKDCVHQDGHKDEKSNIFHSAGVSLALMEGENDAGLPTGFVVYCHQQSKQEDTMRNANPLLKGVKGGDLICGTEAGACKQTHSQDSEVPTDVIYTEAEATSDQLHDQKDSGDENSPCEDFVDKESIIDAHVQAFSSQGHQRILGSLPVAYSPGEATHSEKGIDNINNDFDAEDVKIMGKNTDVMTEINVEMKNNMPQDDNACKLNESSSTTDANCTLRKTFPPESDLPSVDHISISSPKDVSDLLKEANGSTNSGLVGDSGEADSIRKDIIQVDCTSESNYSGNASLPIRRNSRRSKSGHKAQTKRASRKCKNKTCVPLLGGDMKIILEAARKKRSCFSKPARSSIWGLVGNINKFFEQDNELGVDEVMCQGLGRVGGAFKSGTRNKNGSISSSLSSMKKCCASTTRVRLKIKLGKEVHLSCSDVLVPEVMNSVCSASNVGPGSGFQEKNRSAGDKCSEEVAEGKSESLTNNLDEDALYLNGQMANHHLEAAATTEKSNEVAEEACHMIPPERMIETLRETVNDKGMDPGTSPDSEVINSIPEVHVGERHQQGLHDAFLGSSKVSDSFGGVSGCRRRKKKDKVTSSSSSIVEDGSKGPPRKSKTKQSKSHGRKKNSNDVVCSMSLHTSTGINTVSYSICHKELSSESLPPSGEIELEDSTEALKVKSSMKVETTCSPNDNYELLESQGIDNLLPSARSSGRKLPKSLTSCKIITPKSKASDSMSLKKTGSRRREKQLKPIKKSEVKGKAVSAKVISEAEDCLHAEHVDGSYQLDDIQKMNAGDNKVSVNGSNLDMAVGTGLEQQHPSPHNAWVRCDDCHKWRRIPVELADLIEETKCTWTCKDSNDKAFSDCSIPQEKSNAEINAELGLSDASGDEDAHEGCKNYKKLEYQHPTVHQESTFTHILTNEFLHRSGKMQTIDEIMVCHCKPTSEGRFGCGDECLNRMLNIECVQGTCPCGDLCSNQQFQQRKYACLTWFKCGKKGYGLKAIEDISKGKFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEIEGSMPESDVMQAERNLSKDTSLVDKSRSSQVPGNNQEKENSINPSPAIPPLHCPLDEEDSMGKLPLSDVEEISPQMGDAVSKSMPDVQHVLKSELPDDISSIQRMEASATPISKVISNLIKNKRESKSETVEDRPGFPKTHLLVKTSRANGSVKKGKVHANHSNGLKAAVTANRLQAAPIKPKKVVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIRKPFRRHGYGDRDDCKGESQRNFNCNRFSASQNHRRELDVRSTEAIDCVQQSKLVTTSVDAGVQEDCSALSLDGGKVNGTKRRKRKSRWDQPAETISNSPSSPSKKQNVDSGLSMHADAAIDSFDGSQNINEDFPPGFSCPVQPQLPSSNALPHPVDLALQNVSNSECPPDTVIGHPKQKFNSCMPVSYGMPLSFVQQFGTPHAEISGSCLTAPGVPFSPFPPLPCYPQDNKDCQPSSSTNAAAVNKPVEVQQRDMNGPVGCCSDDITPSTTDTSPKDIDLPHEDDKQLYKRLKGSSCDLGRKYFRQQKWNNSKIHRPWFRRNAWGSNGNYTAGGICSVSVGDEPSESKVAFSLEDVICRAEEGDNNVL 2322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2712 2322 SUPERFAMILY SET domain 1356 1566 IPR046341 -
Alju07g2712 2322 Pfam SET domain 1439 1545 IPR001214 GO:0005515
Alju07g2712 2322 Pfam AWS domain 1391 1425 IPR006560 GO:0005634|GO:0042054
Alju07g2712 2322 ProSiteProfiles AWS domain profile. 1376 1426 IPR006560 GO:0005634|GO:0042054
Alju07g2712 2322 Pfam CW-type Zinc Finger 1268 1314 IPR011124 GO:0008270
Alju07g2712 2322 SMART shorttest3 1376 1427 IPR006560 GO:0005634|GO:0042054
Alju07g2712 2322 ProSiteProfiles Post-SET domain profile. 1553 1569 IPR003616 -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 1614 1643 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 738 766 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 62 85 - -
Alju07g2712 2322 ProSiteProfiles SET domain profile. 1420 1545 IPR001214 GO:0005515
Alju07g2712 2322 SMART set_7 1428 1551 IPR001214 GO:0005515
Alju07g2712 2322 MobiDBLite consensus disorder prediction 749 766 - -
Alju07g2712 2322 Gene3D SET domain 1323 1577 IPR046341 -
Alju07g2712 2322 PANTHER SET DOMAIN PROTEINS 775 2048 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 2023 2065 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 1603 1651 - -
Alju07g2712 2322 Gene3D - 1258 1321 - -
Alju07g2712 2322 ProSiteProfiles Zinc finger CW-type profile. 1262 1316 IPR011124 GO:0008270
Alju07g2712 2322 SMART PostSET_3 1553 1569 IPR003616 -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 1173 1199 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 1013 1077 - -
Alju07g2712 2322 MobiDBLite consensus disorder prediction 2045 2064 - -
Alju07g2712 2322 CDD SET_SETD2 1427 1569 IPR044437 GO:0010452|GO:0046975
Alju07g2712 2322 FunFam Histone-lysine N-methyltransferase 1260 1321 - -
Alju07g2712 2322 FunFam Histone-lysine N-methyltransferase 1327 1584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2712 Alju-ChrAlju07 52633388 52648186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2712 1411 1568 C2H2 Transcription Factor Family AT2G23740 33.702 1.98e-19 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju07g2712 SET 1.6e-19 No_clan