Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2702 ATGAGAGAGATGGAAAGGCATCGTGAGCAAGATAGTGAAGCAGCCATCTCATCGAGGGCCGTTGAATTTGGAAGCAATCGCAAAGTAGTTCAAGCTAATACTTCTTCTCTTGGATCTCACAATGAAATACAGAAACCTGGGTGGAGGGACTTTCTATCCTATGTTGGTCCTGGTTTTCTGGTTTCCATGGCCTACCTTGATCCTGGAAACTTGGAAACTGATATGCAAGCTGGAGCCAACCACAGATATGAGCTGCTATGGGTGATACTTGTTGGGCTACTTTTTGCTCTCATTATTCAGTCATTGGCGGCAAATCTTGGAGTAACAACCGGGAAGCACCTTTCAGAGTTATGTAAAGTGGAGTACCCTTCACTAGTGAACTACTGCTTATGGTTGCTGGCTGAGATTTCTGTCATAGCAGCTGATATAGCCGAAGTTGTTGGCACAGCCTTTGCACTCAACATACTGTTCCACATCCCACTATGGGCAGGAGTTATCTTGACCGGCTTCTCCACTCTTTTGCTTCTTGGTCTCCAGAGATTTGGCGTTAGGAAGCTGGAGTTGCTGATATCAATTCTAGTATTTGTAATGGCAGGATGCTTCTTTGTGGAAATGGGCTATGTAAAGCCATCAGCTTCTGATCTGTTGAAAGGAATGTTTATCCCAAAACTAGATGGTCATGGAGCCACTGCTGATGCCATTGCCCTATTCGGAGCACTCATCATGCCGCACAACCTCTTTCTCCACTCTGCTCTTGTGCTCTCTAGAAAAGTACCTATCTCTGTCCGTGGCATCAATGACGCATGCAGATACTTTCTAATAGAAAGTGGGTTTGCTCTGTTTGTAGCATTTCTAATAAACGTAGCAATAGTTTCAGTATCAGGCACGATATGCTCTGCAAATAATCTTTCTGCTCAAGATACAGAAAGATGCGACGATCTCTCCCTTAAATCTGCATCTTTTCTTCTCAAGAATGTGTTGGGAAAGTCCAGCTCAACAGTTTATGCCATAGCACTTCTGGCCTCTGGGCAAAGCTCAACTATCACTGGCACCTATGCAGGGCAGTACATCATGCAGGGATTCTTGGAATTGAGGATGAAAAAATGGATGAGGAATTTGATGACTAGGAGTGTTGCCATAATACCTAGTCTTGTTGTTGCTGTTATTAACGGACCTTCGGGTGCAAGCCGCCTTATTATAATTGCCTCGATGATACTTTCGTTTGAGCTGCCATTTGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCCCCAAGATGGGACCTCACAAGAATTCTATAATTATCATTGTGATTTCATGGATCCTAGGATTGGGAATCATTGGCATAAACGTGTACTACCTAAGCACAGGTTTTGTGGATTGGTTAATTCACAGCAGCCTACCAAAAGTGGCAAACGTGTTCATTGGGATCATAGTATTCCCTCTTATGGCCATTTATGTTGCTGCTGTTATCTACCTCACCTTCAGAAAAGACACAGTCAAAACATTCACTGATACTCTGAACGATTCTCAAGTGCCAACCCACATGGAATTGGGTCCAATTGCTTTTAGAGAAGATTTAAGGGACATCCAACTTCCACATTAG 1608 0.4366 MREMERHREQDSEAAISSRAVEFGSNRKVVQANTSSLGSHNEIQKPGWRDFLSYVGPGFLVSMAYLDPGNLETDMQAGANHRYELLWVILVGLLFALIIQSLAANLGVTTGKHLSELCKVEYPSLVNYCLWLLAEISVIAADIAEVVGTAFALNILFHIPLWAGVILTGFSTLLLLGLQRFGVRKLELLISILVFVMAGCFFVEMGYVKPSASDLLKGMFIPKLDGHGATADAIALFGALIMPHNLFLHSALVLSRKVPISVRGINDACRYFLIESGFALFVAFLINVAIVSVSGTICSANNLSAQDTERCDDLSLKSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLELRMKKWMRNLMTRSVAIIPSLVVAVINGPSGASRLIIIASMILSFELPFALIPLLKFSSSSPKMGPHKNSIIIIVISWILGLGIIGINVYYLSTGFVDWLIHSSLPKVANVFIGIIVFPLMAIYVAAVIYLTFRKDTVKTFTDTLNDSQVPTHMELGPIAFREDLRDIQLPH 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 183 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 371 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 158 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 NCBIfam Nramp family divalent metal transporter 56 422 - -
Alju07g2702 535 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 Hamap Divalent metal cation transporter MntH [mntH]. 36 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju07g2702 535 Pfam Natural resistance-associated macrophage protein 72 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2702 Alju-ChrAlju07 52539434 52542602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2702 24 535 Inorganic Solute Cotransporters AT1G15960 59.417 0.0 631