Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2689 ATGGATTCTCTGTGTGCCTGTATGCAGACGCAGACAGTGGCGACTGTAACCGAGAATTCCTTAACGCTGACAATGAAGATGGAGTCCCAATCTGATGTTGTTGATGAGGATAGTGTTAAGCTGCATAGGGAAGAAGATCTGCAACATTTCCATGTCTTAGCCGTCGACGATAGTCTCATCGACCGCAAGCTTCTCGAGAAGCTCCTTCACCTCTCTTCTTGCAAAGTGACGAGTGTGGACTCCGGCGACAAGGCTTTGAAATATCTTGGTCTTCTTGATGACCTTGATAACGCTTCTTCAGCTTCTTCAGAATCATCACCTTCTTCTCCCCATTCACCCCAACAAGAGGCAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCTGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGGATCTTCCTGGAAACACGTACCAGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATCAGCATGTGCATGGAAGGAGGAGCAGAGGAGTTTCTACTGAAGCCACTGAAGTTATCAGACCTGAAGAAGCTTCAGCCGTACCTTGTGAAATCCAAATCCCACGAGAACCATAACAATAAGAATAATAATAATAATGAGGATGATAATAATTCATCAAGCGAACAAGAATCTGGGAACAGTGATGCAGCAACCGACAATGACTGCAATCCCAACAGTAATAACAACGCTTGTATTACCAAAAGGAAGGCCATGTCTCCTCAGCCTTCTGACAGATCCAGACCCAAATTCAAGGGCTTGGCGGTCGTGTAA 798 0.4524 MDSLCACMQTQTVATVTENSLTLTMKMESQSDVVDEDSVKLHREEDLQHFHVLAVDDSLIDRKLLEKLLHLSSCKVTSVDSGDKALKYLGLLDDLDNASSASSESSPSSPHSPQQEAMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCMEGGAEEFLLKPLKLSDLKKLQPYLVKSKSHENHNNKNNNNNEDDNNSSSEQESGNSDAATDNDCNPNSNNNACITKRKAMSPQPSDRSRPKFKGLAVV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2689 265 Gene3D - 51 225 - -
Alju07g2689 265 SMART REC_2 50 188 IPR001789 GO:0000160
Alju07g2689 265 ProSiteProfiles Response regulatory domain profile. 51 192 IPR001789 GO:0000160
Alju07g2689 265 Pfam Response regulator receiver domain 52 186 IPR001789 GO:0000160
Alju07g2689 265 MobiDBLite consensus disorder prediction 206 245 - -
Alju07g2689 265 CDD REC_typeA_ARR 52 187 - -
Alju07g2689 265 PANTHER TWO-COMPONENT RESPONSE REGULATOR 50 226 IPR045279 GO:0009736
Alju07g2689 265 SUPERFAMILY CheY-like 49 199 IPR011006 -
Alju07g2689 265 MobiDBLite consensus disorder prediction 194 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2689 Alju-ChrAlju07 52412173 52414440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2689 49 263 Response Regulator Gene Family AT3G57040 45.148 4.84e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju07g2689 Response_reg 7.4e-17 CL0304