Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2685 ATGCCGAAACGCTCAAATTCTTCAGCAAGAGCATTTGGCGATTACCCAAAGTCAGCTTCCGAAAACTTAGTAGACATGGCGGATTCAAGGGTGGAGACCATATCAAGACTAGCACAATGGAAAATTGATAACTTCGGACCTTGCTCCTACAAGAAATCCGATCCTTTCAAAGTCGGAATCTGGAACTGGTATTTTTCTATAGAGAGGAATAGGTACCTGTACATACATCTATTTCCTGAGCCTTCCCGGGCTTCTAAGGAACATCCACCAATTGCTCGATTCATTCTTCGAGTTTCTAATACCGGCTCTTCCCGCAGATTCTACATTTCTCCTGTTCATGAACGACTGCTTAGAACATGTGACGATTTTGTCTGGCCCGTGGATACTACATTTGTTGGTCGTTTCATTATTGATGTTGAATTCCTTGACCTGAAGATCTGTCCTCTGAATGGTGGAGAAGCTAGTTCTATATGGCCGTCTGATGGAAAATTGCAATCTGTTGCTGCGCAAAGTGCCCTCCAATGCCTCTCTCGCATGCTTGACGAGGGCATACATGCTGATCTGACCATTAACACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCACCACAACCTGAAGGAAAAAGAATCATCCACGATCCACATTGAAGACATCTCACTAGAATCTTGCATGGCTCTTCTGAGTTACTTGTATGGCACAATAAAGCAAGAAGATTTCTGGAAGCACCGGCTCGAGTTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTAAAGATACCTGTGAGGAAAGCTTATTGGAAGATCTTAACTCAGGAAATGTCCTTGAGAGGCTACACGAGGCATGGCTTTATCAGCTGCCCAAGTTGAAGAAAGGGTGCTTGACCTTCCTATTTGATTTTGGTAAGATATATGACGTACGAGAAGAAATAAATAACTTCTTCAGACATGCTGATAGGGAGCTGATGATCGAGATGTTTCAGGAGGTGCTTACAATTTGGAAACCATTATAG 1056 0.4309 MPKRSNSSARAFGDYPKSASENLVDMADSRVETISRLAQWKIDNFGPCSYKKSDPFKVGIWNWYFSIERNRYLYIHLFPEPSRASKEHPPIARFILRVSNTGSSRRFYISPVHERLLRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEASSIWPSDGKLQSVAAQSALQCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDISLESCMALLSYLYGTIKQEDFWKHRLELLGAANKYDITGLKDTCEESLLEDLNSGNVLERLHEAWLYQLPKLKKGCLTFLFDFGKIYDVREEINNFFRHADRELMIEMFQEVLTIWKPL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2685 351 ProSiteProfiles BTB domain profile. 186 245 IPR000210 GO:0005515
Alju07g2685 351 Gene3D Potassium Channel Kv1.1; Chain A 160 313 IPR011333 -
Alju07g2685 351 PANTHER OS08G0495500 PROTEIN-RELATED 26 350 IPR044714 -
Alju07g2685 351 SMART BTB_4 186 284 IPR000210 GO:0005515
Alju07g2685 351 CDD BTB_POZ_ZBTB_KLHL-like 185 267 - -
Alju07g2685 351 SUPERFAMILY POZ domain 168 282 IPR011333 -
Alju07g2685 351 Pfam BTB/POZ domain 178 282 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2685 Alju-ChrAlju07 52359658 52364004 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju07g2685 BTB 3.7e-23 CL0033