Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2673 ATGGCGCATCTCACCACCGATTCCCCCCTTTCTCGTAGCATAGTTCGTGCTTTCTTAGACTTCCTCAACTCAGTTGAACCGGCCCCTGGCTCTGATGTAGAAGGGCTTGAAGTTGCTAGGGAGTGTTTGACAGAGGTGTTTAAGCTTAACACATCTCCGACAGATGTTCATGCAAAATCTGTTTCTTTGGTCGACATATTCAAGTCCCTTGAATCTAGCAAGCAATGCGAAGCTAGTCAGTCAGATGTTGGTGAACAACCAGATGACATGGATGCATCGGGTTCATTCACTGCCCACAATGCTGATCATAGACAAAAACATTCTGAGGCACGGAAATCCCCGGATGAAGATTGGACTCGAAGGTCTCACACATTTGGAGTATCCAAAGATGAACTGTGTGGGCAATTCTTTAATGCTCTGGAGAAAGTCCACTTCTTTAGGACAAATCCTGATGGAACTGATGACCCAGTGCAACTGGAGAAAGCATCTCGTATATTTAATGATGCTGTAACGGAGATGGAAAGATCTGAGTGTCAGGAGTTTAGTTTGAAGAACATGGCTGAATCACTGAAATCACAAGGTAATAAGGCCGTGCAATCAAAGAAATACCCTGATGCGATTGATTTGTATACTTGTGCAGTTGCACTTTGTGAAGAGAATGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGATCCACAAATATACAGAAGCAATTCAAGACTGTCATAAATCTATCGAGATTGACCCGAACTATAGCAAGGCATACAGCCGACTGGGTTTAGCATATTATGCTCAGGGAAATTACAGAGATGCCATTGATAAAGGGTTTAGTAAAGCCATGCTATTGGATCCAAGTAATGAGTCGATTAAAGAAAATATACGGGTTGCTGAGCAAAAATTGATAGAAGAGCAACATCGTGCCGATCACAGTCAGAACTCAAGATCATCTCAAGAGTCTCATAACCAGTCTGAACGAGGGTCAAGAGGTAATGCAGCCCCACCGCCGTTTAACTCAATGCCGTTTGATGCCAATGATCTTGCAAGCATGTTTATGAACATAGCCGGAAACACTGCCAATGCGCATCAAGGACAGCATCCCCAGGAACGGCAAGGAGAAGATAGCAATACCAATTCATCTAATGAACCTGAAATAAGAATCGGGAGCAATATCAATTTAAACTTTAACCAAATGCCCGAGGAATTGTCGGGGGCTTTCAGGTCTGTGATGGAAATGTTATCTGGGGCAGCGCCTCCAGGCCGTGGGCAACAAGAAGACCATTTCAATGGAAGTACTGCGCCAAACTAG 1314 0.4422 MAHLTTDSPLSRSIVRAFLDFLNSVEPAPGSDVEGLEVARECLTEVFKLNTSPTDVHAKSVSLVDIFKSLESSKQCEASQSDVGEQPDDMDASGSFTAHNADHRQKHSEARKSPDEDWTRRSHTFGVSKDELCGQFFNALEKVHFFRTNPDGTDDPVQLEKASRIFNDAVTEMERSECQEFSLKNMAESLKSQGNKAVQSKKYPDAIDLYTCAVALCEENAVYYCNRAAAYTQIHKYTEAIQDCHKSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFSKAMLLDPSNESIKENIRVAEQKLIEEQHRADHSQNSRSSQESHNQSERGSRGNAAPPPFNSMPFDANDLASMFMNIAGNTANAHQGQHPQERQGEDSNTNSSNEPEIRIGSNINLNFNQMPEELSGAFRSVMEMLSGAAPPGRGQQEDHFNGSTAPN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2673 437 MobiDBLite consensus disorder prediction 362 395 - -
Alju07g2673 437 SUPERFAMILY TPR-like 186 300 IPR011990 GO:0005515
Alju07g2673 437 Gene3D Tetratricopeptide repeat domain 181 338 IPR011990 GO:0005515
Alju07g2673 437 MobiDBLite consensus disorder prediction 100 120 - -
Alju07g2673 437 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 182 332 - -
Alju07g2673 437 MobiDBLite consensus disorder prediction 77 120 - -
Alju07g2673 437 Pfam Tetratricopeptide repeat 221 254 IPR001440 GO:0005515
Alju07g2673 437 MobiDBLite consensus disorder prediction 317 331 - -
Alju07g2673 437 ProSiteProfiles TPR repeat profile. 221 254 IPR019734 GO:0005515
Alju07g2673 437 SMART tpr_5 187 220 IPR019734 GO:0005515
Alju07g2673 437 SMART tpr_5 221 254 IPR019734 GO:0005515
Alju07g2673 437 SMART tpr_5 255 289 IPR019734 GO:0005515
Alju07g2673 437 Gene3D Immunoglobulin FC, subunit C 4 74 - -
Alju07g2673 437 Coils Coil 289 309 - -
Alju07g2673 437 MobiDBLite consensus disorder prediction 415 437 - -
Alju07g2673 437 MobiDBLite consensus disorder prediction 307 346 - -
Alju07g2673 437 PANTHER LD24721P 1 419 IPR047150 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2673 Alju-ChrAlju07 52283722 52290082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2673 186 275 U-box Gene Family AT3G07370 34.444 2.19e-10 59.3