LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2666	ATGGGAGAGGCAAGTGTGATAGAGAAGATAAGCAATGGGTTGGGGAAGGTGAAGCCGTACCTGGCAATGGTATCGCTTCAGTTTGGGTATGCTGGCATGTATATTATCACTATGGTTTCTTTCAGCCATGGCTTGAGCCACTGGATTCTCTCTGTCTATCGTCATATTATTGCCTTTCTCGTCATTGCCCCTTTTGCCTTCTTCCTCGAAAGAAAAACGAGGCCCAAAATGACTCTTCCCGTATTCTTGAGGATACTGGTGCTTGGTTTTCTTGAGCCAGTACTTGATCAGAACTTGTACAACATGGGGATGCAGTACACCTCAACTACGTTTGCTTCAGCCACCGTCAATGTCCTTCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTAGAGAAGTTGAACTTGCGAAAATTACCGAGCATAGCGAAGGTGGTTGGCACAGTGATTACAGTGTCAGGAGCCATGGTTATGACTTTGTACAAAGGATCAGCACTTCACATAATGAAGGAATCATCAGCATCAAGCCATCACGAGGGCTCTTCATCCTCGCCTTCTCAACAGCACTGGTTGCTTGGAACCCTAATGCTCATAGCTAGTTGTGGGGGTTGGGCTAGCTTCTTTATCGTGCAAAACTTCACGTTGAAGAAGTACCCGGCAGAGTTGTCCCTCACCGCTTGGATTTGCTTGACGGGTGTCTTTGAGAGTGCAATCGCTTCCCTTATCATGGAACGAGACATGTCAGTTTGGGCATTAGGCTGGGATTCTAGGCTCCTCGCTTGTGTTTATTCTGGAATTGTGTGCTCTGGAATGGCATACTACATTCAGGGATTTGTGACCAGAGAACGCGGGCCCGTTTTTGTGACTTCTTTCAGCCCTCTGTGTATGATTATCACCGCTGCTTTGGGCACCATTATTTTATCTGAGCAAATTTATGTTGGAAGTATAATTGGAGCAATTCTCATTGTCTCGGGACTTTACACTGTGGTATGGGGGAAAAGCAAAGACCCTCTGAACACAACACAAACAGAGATAGGTGATGGCCATGAATTGCCAATTAAAGACGGCTCTAAGTCTGGAATGCCAGGCAATTTTGAGAGCATTGAGATGAATGTTCCCGCTGATATGATGAAGGGATCGGCAGCAAAATCTTGA	1158	0.4568	MGEASVIEKISNGLGKVKPYLAMVSLQFGYAGMYIITMVSFSHGLSHWILSVYRHIIAFLVIAPFAFFLERKTRPKMTLPVFLRILVLGFLEPVLDQNLYNMGMQYTSTTFASATVNVLPAITFIMALIFRLEKLNLRKLPSIAKVVGTVITVSGAMVMTLYKGSALHIMKESSASSHHEGSSSSPSQQHWLLGTLMLIASCGGWASFFIVQNFTLKKYPAELSLTAWICLTGVFESAIASLIMERDMSVWALGWDSRLLACVYSGIVCSGMAYYIQGFVTRERGPVFVTSFSPLCMIITAALGTIILSEQIYVGSIIGAILIVSGLYTVVWGKSKDPLNTTQTEIGDGHELPIKDGSKSGMPGNFESIEMNVPADMMKGSAAKS	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2666	385	Pfam	EamA-like transporter family	31	159	IPR000620	GO:0016020
	Alju07g2666	385	Pfam	EamA-like transporter family	193	331	IPR000620	GO:0016020
	Alju07g2666	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	53	153	-	-
	Alju07g2666	385	PANTHER	WAT1-RELATED PROTEIN	18	338	IPR030184	GO:0016020\|GO:0022857
	Alju07g2666	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	251	336	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g2666	Alju-ChrAlju07	52233464	52236559	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g2666	14	372	Nodulin-like Gene Family	AT4G08300	62.604	7.36e-162	457