Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2661 ATGCGCCACCCAGTGGCACGTTGCCGTCCGGAGACGATGGCGGAGGCCGTTGAATGGGAATGCCTGGACTGTTCCTCCCTACACTCTGACCTTCCGGTGGCCAACGATAAGACGTCGCCAGAGGGAGCTGGAGATCTTATAGCAGCCATTCGAGCTATACAGGCCGATGGGTCTCTCCCAGATATGGAAAAGGCCAAAAAAGGCCAACGGCTTCCCAGTGGGAAGGCCGTGTGGGAAGAAGAGGAGGAGAAAAAGCGAGAAGGAGATGGAAGCAACATTTTAGACATCCTCAATGGAACGTTTAAGTGCTCATTCTGCCTCCACTTACTAGAGAGGCCTGTCACAACTCCATGCGGGCATAATTTTTGTCTCAAGTGCTTCAAGAAATGGGTCGGCCTTGGCAAAAAGACGTGCGCAAAGTGTCGTGCGGTGATCACTAGCGACGTGGTAAGAGGAATTCGAATTAATTCCGCTGTCGTAAATGCCATTCGCGCAGTGAAAGCGTCTAAAGCTAGTAGTACTGCCGGAGAAACTTCGAGAGTGGCTTCAAGGTTTGCCGTCACTTGTTTGTTAGATGTGAAAATGAACCCGCTCCTTGGACGAGCGATGATCACGGTGGAAATTCAAGAGTTGGAGGAGGCTGTAACCGCAGTTGAAAGGGAAGAAGATCTATCTTGGGGTTATGATGTTGGTCAAGCATGA 702 0.5085 MRHPVARCRPETMAEAVEWECLDCSSLHSDLPVANDKTSPEGAGDLIAAIRAIQADGSLPDMEKAKKGQRLPSGKAVWEEEEEKKREGDGSNILDILNGTFKCSFCLHLLERPVTTPCGHNFCLKCFKKWVGLGKKTCAKCRAVITSDVVRGIRINSAVVNAIRAVKASKASSTAGETSRVASRFAVTCLLDVKMNPLLGRAMITVEIQELEEAVTAVEREEDLSWGYDVGQA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2661 233 Pfam Zinc finger, C3HC4 type (RING finger) 103 141 IPR018957 GO:0046872
Alju07g2661 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 172 IPR013083 -
Alju07g2661 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 10 183 IPR045134 -
Alju07g2661 233 MobiDBLite consensus disorder prediction 63 84 - -
Alju07g2661 233 Coils Coil 201 221 - -
Alju07g2661 233 CDD RING-HC_ORTHRUS_rpt1 101 145 IPR047498 -
Alju07g2661 233 SUPERFAMILY RING/U-box 95 164 - -
Alju07g2661 233 ProSiteProfiles Zinc finger RING-type profile. 103 142 IPR001841 -
Alju07g2661 233 SMART ring_2 103 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2661 Alju-ChrAlju07 52189140 52191322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2661 10 175 C2H2 Transcription Factor Family AT5G39550 48.837 5.74e-36 132