Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2659 ATGTCTCTGAGCCCTCCTCGCCCAACCATAATAATCTATCAGCTCTACTGGTGCTTCCGATGTAATCGTCTGGTGAGGCTGGCCCCAACCCACCCCTCCCACATTATCTGCCCTCGTTGTTTTCAAAGCTTCCTCTGTGAATTCAACCTTCCCACACCCTCACTCCTCTCCCTCCCTTCCCCTCAAGCTCGTTTGCTTGATGCCCTCTCTCTCATGATCCACCCTCCCCTCCGCCGCTTCTCCGATGACCCACCTCACCAACTCCAAGGCCCAACTCGTGACAACCCACGTGTCGAAATTCCGGTTCGTCGCATAAGACGTCCCCGACATCATAGTTTTGATGCCAGGGTTAGTGGTTTCGACCCAGAACTACCAGAGACCCAACCTTGTCCTCGGACTTGGGTTGTTGTTCCACCTGGTGACCGTTCCAACTCATTCGAACGGATTCCTCGGCGGCACGATCCAATCCCACAACGGGCTGATCCCAGAGACTACTTTTTCGGGCAGGGGTTGGATGAACTGATTCAGCAACTGACGGAAAATGACCGGCAAGGCCCGCCTCCGGCGCCGGACAGAGCTATCGAAGCAATTCCGACGGTGAGAATAATGGAGAGCCATTTGAAGGAGAACCCTTATTGCCCTGTTTGTCAGGAGGAGTTTGAGGTGGGTGGGGAAGCAAGGGAGTTGGCCTGTAACCATATATATCATTCTGGTTGCATCGTGCCATGGCTCCAGCTCCACAATTCTTGCCCCGTTTGCCGCCACGAGGTGACCGCGCGTTCTGGCTACACCGACTCAAGTGACGGTGGCGGTGGCAGGGTGCGGCGGTGTTTGAGGTGGACTCAGTTGGCTTCACTTTGGCCTTTCCATGGAAGGTTCCGACGGGTTAATCCTGAACGCTAG 903 0.5526 MSLSPPRPTIIIYQLYWCFRCNRLVRLAPTHPSHIICPRCFQSFLCEFNLPTPSLLSLPSPQARLLDALSLMIHPPLRRFSDDPPHQLQGPTRDNPRVEIPVRRIRRPRHHSFDARVSGFDPELPETQPCPRTWVVVPPGDRSNSFERIPRRHDPIPQRADPRDYFFGQGLDELIQQLTENDRQGPPPAPDRAIEAIPTVRIMESHLKENPYCPVCQEEFEVGGEARELACNHIYHSGCIVPWLQLHNSCPVCRHEVTARSGYTDSSDGGGGRVRRCLRWTQLASLWPFHGRFRRVNPER 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2659 300 SUPERFAMILY RING/U-box 193 260 - -
Alju07g2659 300 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 92 257 - -
Alju07g2659 300 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Alju07g2659 300 Pfam zinc-ribbon 14 47 IPR039525 GO:0061630
Alju07g2659 300 Pfam Ring finger domain 212 254 IPR001841 -
Alju07g2659 300 FunFam E3 ubiquitin-protein ligase RING1-like 176 260 - -
Alju07g2659 300 SMART ring_2 213 253 IPR001841 -
Alju07g2659 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 260 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2659 Alju-ChrAlju07 52164900 52165802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2659 153 289 C3H Transcription Factor Family AT1G68180 40.000 1.33e-28 108