Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2656 ATGGCCATGCCCATGCCTATTGACATGTATGCTATCCCTGAGCTCGGCTTTTCCGACTACACTGCCGCTACTTCTTCCGACGAGGATTGTAACTACTGGAACCACTGGTCACCCGTCGTCAACTGGGACGCCCTCACATGTGGGCCCGGACATGAAGGCTTCCATGACCTCATGGAAACCATGATGGACGACGCAGCCGGTGTAATGAGCCCCCAAACAGATCCCAGCGTGGAAGAGGAAGGATGTAGCAACTCCGCCACCACGACGGAGGCGACCACGGCCGACGATGAAGTAGACGGTGGTTTGGAGGATTTCAATAAGGGCCTGAGACTGGTGCACCTCCTGATGGCTGCCGCCGAGGCTCTCACCGCAGTCAACAACGGTCGTGATCTGGTTATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCGACCCACGGAACCAACATGGAGCGGCTAGCAGCTTATTTTACGGATGCCTTGAGGGTCTTGGTAGAAGGGGCCCACAATACTAAGCATTTGAATTGGATCGCCAACAGTGGCGGCGACGACAACCGTCACCAGACCGACATGCTCACCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTGGAGGCGGTAGTCCACGACAGGCGGGTCCACATCGTCGACTATGACATCATGGAGGGGACCCAATGGGCCTCCTTGATTCAGGCCCTGGCCTCCCGCAAGGATGGCCCACATATCAGGATCACAGCCATCTCCAGGACGGGAAGTGCTCGGAGATCAATCGCCACCGTCCAAGAGACTGGCCGCCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCCTTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAGATGTTCCGACCGTCCGCCGTGAAACTGGCTCGTGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCAGGGGAATCGGTGGATTCGTTTCTCCGGGGAGCGGAGGAGTTGAAGGCGAGGGTGGTGACGTTGGTGGAGGAGGACGGTGGGCCGAAGGGGAAAGAAGTGGGGTTTGTGGGGAGGTTCATGGATAGGCTGCACCATTATTCGGCGGTGTATGATTCGATGGAGGCGGGATTTCCGATGCAGGATCGGGCGAGGGCGTTGGTGGAGAGCGTATTCCTGGGGCCTCGAATAGTGGCGTCGTTGGCCCGCATATACAGAATGGGGGAATCAGAGAGGGGGCCGTGGGGGGAGTGGTTGGGTGAGGAAGGGTTCAGGGGAGTGGACATAAGCGTCGCCAATCACTGTCAAGCGAAGCTGTTGTTGGGTTTATTCAACGACGGATATGAATTGGAGGATGTGGGCTGTAAAAATAAGTTGGTTTTGAGTTGGAAATCAAGGCGCTTGCTTTCCGCTTCTGTTTGGACCCCTTTTGTAAGTTAA 1476 0.5718 MAMPMPIDMYAIPELGFSDYTAATSSDEDCNYWNHWSPVVNWDALTCGPGHEGFHDLMETMMDDAAGVMSPQTDPSVEEEGCSNSATTTEATTADDEVDGGLEDFNKGLRLVHLLMAAAEALTAVNNGRDLVMVILVRLKELVSPTHGTNMERLAAYFTDALRVLVEGAHNTKHLNWIANSGGDDNRHQTDMLTAFQLLQDMSPHVKFAHFTANQAILEAVVHDRRVHIVDYDIMEGTQWASLIQALASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDEMFRPSAVKLARGEAVVFNCMLHLPHQSYRAGESVDSFLRGAEELKARVVTLVEEDGGPKGKEVGFVGRFMDRLHHYSAVYDSMEAGFPMQDRARALVESVFLGPRIVASLARIYRMGESERGPWGEWLGEEGFRGVDISVANHCQAKLLLGLFNDGYELEDVGCKNKLVLSWKSRRLLSASVWTPFVS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2656 491 MobiDBLite consensus disorder prediction 69 90 - -
Alju07g2656 491 ProSiteProfiles GRAS family profile. 102 487 IPR005202 -
Alju07g2656 491 Pfam GRAS domain family 111 487 IPR005202 -
Alju07g2656 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 483 IPR005202 -
Alju07g2656 491 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2656 Alju-ChrAlju07 52131258 52132733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2656 73 488 GRAS Transcription Factor Family AT3G54220 34.483 3.96e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju07g2656 GRAS 3.3e-93 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2656 07 52131258 52132733 Alju07g2656 07 52131258 52132733 ECH