Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2644 ATGCAAGAGACAGCAGCGATGGAGGATTTGCAGGGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGAAGATAAGGGTCGCTGTCTCTTTGCTACGAGAGATTTTTACCCAGGAGACGTAATTATAAGCCAAGAACCTTATGTCTGTGTGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGGTGTTTTGCAACAAGTAAACTTAAAAGGTGCTCTGGTTGTCAAGTTGTATGTTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTCCTCTCAAGGCTGGAAAAGAACAAGAGAACATCTGTCACACCATCCATTCGACTGATGGTAAAACTTTATATTCGAAGGAAGTTGCAAAGTGAAAAGGTTGTCCCAAGCAGCGCTACAGACAACTATAACTTGGTGGAGGCATTAGTGGCACACATGTCTGACATCAATGAGGAACAGCTGGTTCTGTATGCACAGATGGCTAATCTTGTAAGCTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTACAGAAAATTTTTCCAAGTTTGCATGCAATGCACATACCATTTGTGACAGTGAACTGAGACCATTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTTCTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTACAATATATACCCAAAGGTTCAGAAGTTCTGATAACTTATATAGAGACTGCTGGGAGCACTATGACCCGGCAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGCTCCTGCCCCTGCTGTGTTAAAGTGGGCCAATCTGATGATATTCGAGAAAGTGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTGTGGTTTCTTGATTCGTACTAGCGATGGAAAAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTGTCTGAAGACAAAGCTTCTAAACTTAATACAACTGGCAATTATCAGGAAGCTGTTGCTGTATACAAAATAATTGAGAAATTCCAATCAAAATTGTGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGTTGGAACATTGGACAGAAGCTCTGGCATACTGCAAATTGACCCTACCAGTCTATCAGAGAGTTTATCCAGCAGTTCATCCGTTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGAATGGTATCTGGGGGACACGGAGGGTGCTGTTAAATCGCTGACTAGGGCAGTGGATATACTAAGAATCACCCACGGCACAAATACACCTTTCATGAAGGAACTATTGATGAAGTTGGAAGAAGCCCGTGCAGAAGCCTCTCACCAATAG 1449 0.4217 MQETAAMEDLQGALKDRNLTVSTVEDKGRCLFATRDFYPGDVIISQEPYVCVPNNSSAETRCDGCFATSKLKRCSGCQVVCYCGSTCQRAEWKLHRLECEVLSRLEKNKRTSVTPSIRLMVKLYIRRKLQSEKVVPSSATDNYNLVEALVAHMSDINEEQLVLYAQMANLVSLILQWPEINIKEITENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQYIPKGSEVLITYIETAGSTMTRQKALKEQYLFTCSCPCCVKVGQSDDIRESAILEGYRCKNEKCCGFLIRTSDGKGFQCQECGLVRDMEEIKLIATEVKSLSEDKASKLNTTGNYQEAVAVYKIIEKFQSKLCHPFSISLMQTREKLLKLLMELEHWTEALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEGAVKSLTRAVDILRITHGTNTPFMKELLMKLEEARAEASHQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2644 482 Pfam MYND finger 62 99 IPR002893 -
Alju07g2644 482 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Alju07g2644 482 Gene3D SET domain 30 280 IPR046341 -
Alju07g2644 482 SMART set_7 17 260 IPR001214 GO:0005515
Alju07g2644 482 Pfam SET domain 28 253 IPR001214 GO:0005515
Alju07g2644 482 Gene3D - 61 108 - -
Alju07g2644 482 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Alju07g2644 482 ProSiteProfiles SET domain profile. 17 254 IPR001214 GO:0005515
Alju07g2644 482 Gene3D - 112 196 - -
Alju07g2644 482 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 22 474 - -
Alju07g2644 482 Gene3D Tetratricopeptide repeat domain 408 482 IPR011990 GO:0005515
Alju07g2644 482 SUPERFAMILY SET domain 12 253 IPR046341 -
Alju07g2644 482 SUPERFAMILY TPR-like 347 453 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju07g2644 SET 2.9e-15 No_clan