Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2569 ATGGGAAGATCCCCTTGCTGCGATGAGAATGGCCTCAAGAAAGGACCATGGACTCCCGAGGAAGACGAAAAGCTTGTTGAGTACATTCAGAAACACGGCCATGGAAGTTGGAGAGCTCTTCCCAAGCTAGCTGGTCTGAATAGATGTGGAAAAAGCTGTAGGCTAAGGTGGACCAATTATTTGAGGCCTGACATCAAAAGAGGCAATTTTTCTCAAGAAGAAGAGCAAACCATATTGCATCTCCATTCCATCCTTGGAAACAAATGGTCAGCAATTGCATCCCATCTTCCGGGCAGGACTGATAACGAGATCAAGAATTTCTGGAACACACATCTAAAGAAGAAGTTAATTCAGATGGGTTTTGATCCAATGACCCACCAGCCACGAACAGATCTTGTTTCCACTTTGCCCTATCTGCTAGCTCTGGTTAACATGACCGACCTTATGGACCCTCATGACCAGGTTGTGAAACTACAAGCAGAGGCACTTCAAATGGCAAAGCTTCAATACTTAAACTCTTTGCTCCAATCCACAACAACTTCCTTGAATCCCACCACCAACCCCAGTGACCAAAATGGCCTCATCACAAACATGGAAACCATCAATATGTTGAATTCAATGGCTAATTTGAAAGAGAACCCAGACACGATGAACTACCCACAGCAGTTGAATAATAATAATAATCATCCAGGCTCATTTTCTCATTATGGGATAGCTACCCAACCACTCCACCACCCAAACATGTTATTATCTCACATGTCATCAGACCCACCACAAGTCCCTTTCAGCTCTCAATCATGTCTGAATAGTGATCAATATCAGGGTCAAGTTACAAACTTTACAATGATTAGTCAAGGGGGTCATCATCATACGACACCTGATCATGATGAATCTTCATCAATATTGCCATTATCTATGCCCCCTCTGGTTGGAGATGCCACCAGCAGCTCTTCTAGCCATGGAGGAATTTCCTCTTTATCTTATTGGCCTGAACTATTTTTCGAGGACTCCATTATGCATGAGCTCTCTTAG 1032 0.4341 MGRSPCCDENGLKKGPWTPEEDEKLVEYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGNFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLLALVNMTDLMDPHDQVVKLQAEALQMAKLQYLNSLLQSTTTSLNPTTNPSDQNGLITNMETINMLNSMANLKENPDTMNYPQQLNNNNNHPGSFSHYGIATQPLHHPNMLLSHMSSDPPQVPFSSQSCLNSDQYQGQVTNFTMISQGGHHHTTPDHDESSSILPLSMPPLVGDATSSSSSHGGISSLSYWPELFFEDSIMHELS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2569 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju07g2569 343 CDD SANT 69 112 IPR001005 -
Alju07g2569 343 CDD SANT 16 61 IPR001005 -
Alju07g2569 343 Gene3D - 69 116 - -
Alju07g2569 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 246 - -
Alju07g2569 343 MobiDBLite consensus disorder prediction 285 321 - -
Alju07g2569 343 Gene3D - 13 66 - -
Alju07g2569 343 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju07g2569 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju07g2569 343 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju07g2569 343 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju07g2569 343 SMART sant 13 63 IPR001005 -
Alju07g2569 343 SMART sant 66 114 IPR001005 -
Alju07g2569 343 FunFam Transcription factor MYB39 69 130 - -
Alju07g2569 343 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju07g2569 343 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju07g2569 343 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2569 Alju-ChrAlju07 51362020 51363263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2569 1 343 MYB Transcription Factor Family AT1G34670 52.432 6.07e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2569 Myb_DNA-binding 1.1e-17 CL0123