Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2560 ATGGCTCGTCATCAACGGTCCCAGTTCGGCGACACCACATTCACCAAAGTGTTCGTGGGAGGACTAGCTTGGGAGACACCCACTGATGAAATGCGTAGATATTTCGAGCAGTTCGGTCACATTCTTGAAGCTGTTATCATCAAAGATAAGCACACTGGAAAGTCTAAAGGCTACGGATTCGTAACTTTCCGTGATCCTGACTCAGCAAGAAAAGCCTGTGCTGATCCCAAACCTATGATATATGGAAGGAAAGCAAATTGCAATATTGCTTCTCTAGGACGCCCTCCATCTCCTCGAGGAACGAATATATCGGTGCAAGATGGAGGTAAACAAGTCACAGCACGAGAAAAGCCGGCGGCCTATTACAATGGAGTTCCGGCAGCCGCAGCGGCAGCGCCACCTTCTCTGATGTACTCAGCAGCGTATAGCTATCCGACCTACACTAATGATTATGGGTTCCACCAAGCACAATACTATCAACAATTCTATGGACAATCATATTCATATTACTATGGGTATTGTGTCCAAACACCAAGGCCAAGGGCTGCATCCCCATCTGCAGGTGCCTCCTATCCATACTACCCTACGTATACCCCCATGGAAGGCTATTGTCCTCCTATGCCCTTTACTGATTCTCGGACCCAGCAACGAAGCTCCTTGGAGACAACAGCTGCAGTAGGTATAACTTCAGAAAGTGCCAATAGCCAAGGGAAGAACTGA 720 0.4792 MARHQRSQFGDTTFTKVFVGGLAWETPTDEMRRYFEQFGHILEAVIIKDKHTGKSKGYGFVTFRDPDSARKACADPKPMIYGRKANCNIASLGRPPSPRGTNISVQDGGKQVTAREKPAAYYNGVPAAAAAAPPSLMYSAAYSYPTYTNDYGFHQAQYYQQFYGQSYSYYYGYCVQTPRPRAASPSAGASYPYYPTYTPMEGYCPPMPFTDSRTQQRSSLETTAAVGITSESANSQGKN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2560 239 MobiDBLite consensus disorder prediction 208 239 - -
Alju07g2560 239 Gene3D - 2 108 IPR012677 -
Alju07g2560 239 PANTHER BOULE-RELATED 6 217 - -
Alju07g2560 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 92 IPR000504 GO:0003723
Alju07g2560 239 SUPERFAMILY RNA-binding domain, RBD 14 112 IPR035979 GO:0003676
Alju07g2560 239 MobiDBLite consensus disorder prediction 209 239 - -
Alju07g2560 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 74 IPR000504 GO:0003723
Alju07g2560 239 SMART rrm1_1 16 88 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2560 Alju-ChrAlju07 51274935 51277568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2560 11 178 C2H2 Transcription Factor Family AT2G19380 28.571 9.94e-16 74.3