Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2537 ATGGCACTTGAGGCTGTGGTGTTCCCACAAGATCCATTCAACTATAGTTACATGTTAGGACTTGGTTATGGTTTAGAAGCAGAACAAGAGAGAGGCTTTGTTGGGATCACAGGCAATAATAATACGAATTGGGATTATTCTTCGGTGTTGCAGGACGTGAAGGAGTCATGGGACAGCTCTAACTCATCTCCACAACAATCTGTTGTGTCCCCTCCGGCGGCTTCTTCCACAGGAGGAGGAGGACGCAAACGACGTCGCACCAAGACCACCAAGAACCAGGAGGAAATCGAGAGCCAGAGGATGACCCACATTGCCGTGGAGCGTAATCGCCGGAAGCAGATGAATGAGTACTTGGCCGTGCTCCGATCCTTGATGCCTCCTTCTTATGCTCAAAGGGGTGACCAAGCTTCTATAATTGGAGGCGCTATTAACTTCGTAAAACAACTGGAACACCATCTTCAGTCTATGCAGGGACAGAGCAAAACAAGGCCACGCACAGAACAGAGCCCCTTTGCCGAGTTCTTCACGTTCCCTCAGTACACAACACCTGCAACTCAGAGCAGCTGCGGCTGTACGGCGGCGAACGACGTCGTGATGGGACAAAACCAGAAGGACGTTGGAGCGGCCGACATAGAAGTGAGCTTGGTGGACAGCCACGCCAACCTCAAGATACTCTCCAAGAAACGGCCGGGCCAGCTTGTGAATATGGTCGTTGGGATTCAGAGTCTTAGACTCTGTATTCTTCACCTTAATGTTGCCACAACTCTCGACGATATGGTTCTGTACTCTGTTAGCGTAAAGGTTGAGGATGAGAGTCGGTTGAACACAGTAGATGAGATTGCAGCTGCTGTGAATCAAGTAATGCGCAGAATTCAAGAAGAAACTGCCTTCTGTTGA 897 0.4972 MALEAVVFPQDPFNYSYMLGLGYGLEAEQERGFVGITGNNNTNWDYSSVLQDVKESWDSSNSSPQQSVVSPPAASSTGGGGRKRRRTKTTKNQEEIESQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIIGGAINFVKQLEHHLQSMQGQSKTRPRTEQSPFAEFFTFPQYTTPATQSSCGCTAANDVVMGQNQKDVGAADIEVSLVDSHANLKILSKKRPGQLVNMVVGIQSLRLCILHLNVATTLDDMVLYSVSVKVEDESRLNTVDEIAAAVNQVMRRIQEETAFC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2537 298 MobiDBLite consensus disorder prediction 55 97 - -
Alju07g2537 298 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Alju07g2537 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 166 IPR036638 GO:0046983
Alju07g2537 298 SMART finulus 104 155 IPR011598 GO:0046983
Alju07g2537 298 CDD bHLH_AtFAMA_like 101 169 - -
Alju07g2537 298 MobiDBLite consensus disorder prediction 55 74 - -
Alju07g2537 298 PANTHER MAX DIMERIZATION, MAD 63 294 - -
Alju07g2537 298 Gene3D - 83 164 IPR036638 GO:0046983
Alju07g2537 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2537 Alju-ChrAlju07 51094362 51095443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2537 1 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 49.511 2.78e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g2537 HLH 1.5e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2537 07 51094362 51095443 Alju08g0521 08 3725190 3726363 CCT
Alju07g2537 07 51094362 51095443 Alju07g2537 07 51094362 51095443 ECH