Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2536 ATGCCCTCCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTTCTTCATTCCTCTTTCCCTTCCTTTGCCCAGCCTACGTTTGCCCCTCCTTTCTCTGCCCCGCCCGATTCATTATCCCATATCCGATTCGATAAATCCATGGCCATCGTTTTGGTCATCCTCGTCGTCGTCTTCTTCGCCTTGGGTTTCCTCTCCGTCTACTCTCGTCAATGCGCAGGACGACGATTCCGAGGAACCGACGACGATTTCCCCATCGGGAACAGCGAGCGCCACCCCCGCGGCCTCGACCCCGAAATCATCCGAACCTTCCCCACCTTCGTCTACTCCACCGTCAAGGGCCTTAAAATTGGAAGAAGCACCCTGGAATGCGCTGTCTGCTTGAACGAGTTTCAAGATCACGAAACTCTGCGTTTCATTCCCAAATGCAGTCACGTGTTCCACCCCGCTTGCATCGACCTCTGGTTATCCTCTCACTCTACCTGCCCTGTTTGTCGGGCCAACCTAATTCCCAGGCCGGATGAAGTCTCCTTCATCGCAATTCAGATGCCCGACTCTCCTGCCGAATCCGATCGCCAACAGAACGCCGGCGATATCATCCAACATGATCAACAAGTAGGTGAATCATTATTCCCCAAGAACAGAGACATCTTCCGTCGGAATTATTCTTCGCCGAGGTCAGGGATTTCCAGCTTGTTTCCACGATCACACTCGACGGGACACTCGCTGGTTTCGGCGGCGGAGGATCTGGAGAGATTTACTCTGAGATTACCGGAGGAGGTGAGGAAGGGGCTTCTTAGGCCGGCATTCCAGAGAATAAGTAGTGAGAGGAGTGGTTACAGGACGAGAAGCGTGGGGAGTGGAGTTGGGCGGTTCGAGCGGTTCAGGAGACCGGAGGGGCGGTCCGACTGGTGGCGGTTCATCCATAGGAATAATGCTTCGTCCAGGGAGAGCAGCACGAAGCCACATGCGAGCATGCAAAACTTAGAAGAAAGATCGACGGATCGGTTATGCGCTGAGCCAAGTGAGGATTTGCCGCATCGCTAG 1041 0.5495 MPSLPLPLLLLLLLHSSFPSFAQPTFAPPFSAPPDSLSHIRFDKSMAIVLVILVVVFFALGFLSVYSRQCAGRRFRGTDDDFPIGNSERHPRGLDPEIIRTFPTFVYSTVKGLKIGRSTLECAVCLNEFQDHETLRFIPKCSHVFHPACIDLWLSSHSTCPVCRANLIPRPDEVSFIAIQMPDSPAESDRQQNAGDIIQHDQQVGESLFPKNRDIFRRNYSSPRSGISSLFPRSHSTGHSLVSAAEDLERFTLRLPEEVRKGLLRPAFQRISSERSGYRTRSVGSGVGRFERFRRPEGRSDWWRFIHRNNASSRESSTKPHASMQNLEERSTDRLCAEPSEDLPHR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2536 346 MobiDBLite consensus disorder prediction 311 346 - -
Alju07g2536 346 MobiDBLite consensus disorder prediction 311 325 - -
Alju07g2536 346 SMART ring_2 122 163 IPR001841 -
Alju07g2536 346 PANTHER RING FINGER DOMAIN-CONTAINING 27 174 - -
Alju07g2536 346 CDD RING-H2_EL5-like 121 164 - -
Alju07g2536 346 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 169 IPR013083 -
Alju07g2536 346 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Alju07g2536 346 MobiDBLite consensus disorder prediction 326 346 - -
Alju07g2536 346 Pfam Ring finger domain 121 164 IPR001841 -
Alju07g2536 346 SUPERFAMILY RING/U-box 116 171 - -
Alju07g2536 346 FunFam E3 ubiquitin-protein ligase ATL6 84 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2536 Alju-ChrAlju07 51077654 51078694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2536 6 305 Rapid Response to Elicitors AT3G05200 37.931 2.16e-56 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2536 07 51077654 51078694 Alju07g2536 07 51077654 51078694 ECH