Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2524 ATGGAATTTGAGGAGCACGACGAGCAAGAGGACGACATCGAGATCCCGGTGTCGCCTCCTGCTTACGACTCCCTCCCCAACAACTCTGTCCCCAGGTCCAAACTAAACGTCTCCGGAGCACCAGCAGGAGAGGGTACTGGCGCCTCCGCCGTCACCCCTGGCCGTAAAGCTGAGCCCGCCAGGTACCGAGAATGCCAAAAGAACCACGCCGTCAGCCTCGGTGCACACGCGGTCGACGGCTGCGGAGAGTTCATCCCGGCGGGAGAGGAAGGCACGCTCGACGCCCTAAAATGCGCCGCTTGTAACTGTCACCGCAATTTCCACCGCAAGGAGACAGACAGCGGGGAAATGACCCCGTATCAGCCTCCGCCTCCGCCGCCGCCGCACTACCAGTACCACCAGCAGTATCCCCCGTACTACCGTGCGCCGCCGCCTCCAGCCGGGTACCTCCACCACCATCTAACAGCTCAGCCGATGGCGCTGCAGCGGTCGTTGGCTCTGCCGGCTCCGGCGCCGATTAGAGACGAAGAGGACATGTCGAATCCGAGCAGCAGCGGAGGCGGTGGAAGTGGCGGTGGGGGAGGGAAGAAAAGGCTTAGGACCAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGAATTCGCGGAGCGGGTCGGGTGGAGGATCCAGAAGCATGATGAAGCTGCGGTGGAGCAATTCTGTGCGGAAACTTGTGTCAAGAGACATGTACTTAAGGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA 780 0.6 MEFEEHDEQEDDIEIPVSPPAYDSLPNNSVPRSKLNVSGAPAGEGTGASAVTPGRKAEPARYRECQKNHAVSLGAHAVDGCGEFIPAGEEGTLDALKCAACNCHRNFHRKETDSGEMTPYQPPPPPPPHYQYHQQYPPYYRAPPPPAGYLHHHLTAQPMALQRSLALPAPAPIRDEEDMSNPSSSGGGGSGGGGGKKRLRTKFTQEQKEKMLEFAERVGWRIQKHDEAAVEQFCAETCVKRHVLKVWMHNNKNTLGKKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2524 259 NCBIfam homeobox domain, ZF-HD class 196 253 IPR006455 -
Alju07g2524 259 FunFam Zinc-finger homeodomain protein 2 185 257 - -
Alju07g2524 259 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 61 111 IPR006456 -
Alju07g2524 259 MobiDBLite consensus disorder prediction 172 198 - -
Alju07g2524 259 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 111 IPR006456 -
Alju07g2524 259 MobiDBLite consensus disorder prediction 1 60 - -
Alju07g2524 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 50 255 - -
Alju07g2524 259 Pfam ZF-HD protein dimerisation region 61 112 IPR006456 -
Alju07g2524 259 SUPERFAMILY Homeodomain-like 183 257 IPR009057 -
Alju07g2524 259 Gene3D - 181 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2524 Alju-ChrAlju07 50987071 50987850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2524 1 255 ZF-HD Transcription Factor Family AT4G24660 50.769 2.48e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju07g2524 ZF-HD_dimer 1.2e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2524 07 50987071 50987850 Alju08g0530 08 3814717 3815760 CCT
Alju07g2524 07 50987071 50987850 Alju07g2524 07 50987071 50987850 ECH