Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2523 ATGGGCTTCCTCTCGTGCAATGCTCAATCTGCAGTCGCCACCTGTGATTCCCACTACTGGGACCTCAAGAAGAGGACTTCCAACAGAACCAAGAGAAGAACTCTCAAGCATAAGCTCGTTGAGATCCGGGAGTTTCAGTTCTCGGAGCTCCTCGCAGCCACCCGCGGCTTCTCCGCTGATAGCTTCCTTGGCAAAGGCAGCCATGGCTGTGTCTACAAAGCTGCCCTCGACGACGGCAAGCTTATCGCCGCCGTCAAAAGAACAAAGTTCTCCAAGCCTCAGGTCACTAGCCTCCGCAACCACTCCGCAAACTGTACCGGCTGTGCTAATTGTACAAGCCCTGCCGAGAACGAGATCGAGATTCTCTCTCGGGTTCGAAATCCTCGCCGCTTCGTCAACCTCATTGGTTTTTGCAATGACTCCAGCGGGAATCAGTTGATTGTCGTTGAGTATATGCTCAACGGTTCTCTCTACGAAGCCCTGCACTCCAACACCAGACCGCCGGGTTGGAGCCGCCGGGTTCGGTTCGCTCTGCAGGTGGCAAAAGCTGTGCTGGCGCTTCACTCCTCGAATCCGCCGGTGATTCACCGAGACATAAAGTCGTCCAACGTTCTGATTGACGAGAAGGGAAAGGCGAGGCTGGGCGATTTCGGTCTGGCATTGAGGGGACACGTGGAGGACGTTCGGGTGAAATGCACGCCGCCGGCGGGGACGATGGGATACCTGGACCCGTGCTACCTGGCGCCCGGGGATCTGAGCACGAAGAGCGACGTGTTCAGCTTCGGGATCTTGCTGTTGGAGATCATCAGCGGAAGGAACGCGATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCGGTGCCGTTGATAAAGAGTGGGGAGTTCCTCGGAATCTGTGACCGGCGAATTGGGAGGCCGTCGGACACGGCGATTATAAGGCAGCTGGGGACGTTGGCGGCGAAGTGCGTGAGGTCGACGGCTGAAAAGAGGCCGTCAATGTCGGAGGCAGTGGAGTGGCTGGACCAGGCGAGGAAGAGGATGCAGGCGACGCCCATATGGAGGGGTCTGAGGCGGCGGGAGGAGAATAAAGCAGAATTGGGCGATAGGGGAGAGGAAGTAGTGGGAGGAATAGTGAGAGGGGGGAGCAGAAGGAACGGGAAAGTGTCGAGCGTGGGTGGTGGGGAGCAAGAGAACGAGATGAGTGAAGATTGCAATAATGGAGTGTGGAGGTCGAGATCAATGCCCAACGGGGATGTGGGTGGCATTATTGTGAGGAGCCTCATCAACAGATCAAGGTCCATGTCCATGGAGGGTTTTGCAAACTTCACTTCGCCTACAGAATTACACGAGACGAGAGGGGACGAACAACCCATTCGATCAAAACCAAGATTAATTATATCCTACAAATTGAATTAG 1422 0.557 MGFLSCNAQSAVATCDSHYWDLKKRTSNRTKRRTLKHKLVEIREFQFSELLAATRGFSADSFLGKGSHGCVYKAALDDGKLIAAVKRTKFSKPQVTSLRNHSANCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCNDSSGNQLIVVEYMLNGSLYEALHSNTRPPGWSRRVRFALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPCYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKSGEFLGICDRRIGRPSDTAIIRQLGTLAAKCVRSTAEKRPSMSEAVEWLDQARKRMQATPIWRGLRRREENKAELGDRGEEVVGGIVRGGSRRNGKVSSVGGGEQENEMSEDCNNGVWRSRSMPNGDVGGIIVRSLINRSRSMSMEGFANFTSPTELHETRGDEQPIRSKPRLIISYKLN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2523 473 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Alju07g2523 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Alju07g2523 473 Gene3D Transferase(Phosphotransferase) domain 1 152 358 - -
Alju07g2523 473 SUPERFAMILY Protein kinase-like (PK-like) 41 351 IPR011009 -
Alju07g2523 473 Gene3D Phosphorylase Kinase; domain 1 26 151 - -
Alju07g2523 473 Pfam Protein kinase domain 60 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2523 473 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
Alju07g2523 473 MobiDBLite consensus disorder prediction 379 404 - -
Alju07g2523 473 PANTHER OS01G0253100 PROTEIN 24 349 - -
Alju07g2523 473 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2523 473 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2523 Alju-ChrAlju07 50978866 50980287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2523 43 353 Receptor kinase-like Gene Family AT3G59420 41.139 2.02e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju07g2523 Pkinase 5.6e-35 CL0016