Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2501 ATGAAAGGTGAATATGTGGAGCAACAGGCCAAAGCCTCCGATCCTCCAAATATGTTCTCCAAGCTTCACCACCATCCCTTCCCTCACCACCCCTTTCACCTCTCTCGTGATTCCCAAACCTCCGAGGACGACGACACTCGCAGCGCCACCGCCACCCCCACCCCCAACCACCCTCCAAAGCCTTCCTCCGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCTAGAGGCCGCCCTCCCGGCTCCAAAAACAAGCCCAGGCCTCCTGTTATCATAACTCGCGACCCTGAGCCCACCATGAGTTCCTTCATCCTCGAAGTCCCCGGCGGTACGGATGTCGTCGAAGCGATTGCTCGCTTTTGTCGCCGCAAGAACACCGGTCTCTGTGTTTTAACTGGATCGGGAACGGTCGCTAACGTCACCCTTCGTCAGCCCTCTACTACCCCCGGGGCTACTGTTACTTTTCACGGCCGTTTCGATATCTTGTCCATATCCGCCACCTTTCTCGCCAACCAGCCAGCTGGCGCTGTGCCGGCGGTTCCCAACAGCTTTACGATATCGCTAGCGGGTCCGCAGGGTCAGATCGTTGGAGGACTGGTCGCCGGTAGTTTGTTGGCGGCGGGAACCGTGTTCATCGTTGCCGCTTCCTTCAATAACCCATCCTACCACAGGCTGCCTGCAGAAGAGGACGTCAGAAACTCCGTCTCTGGCGGCGGCGGAGATGGTCAGTCCCCGCCACTCTCCGGAGGCGGTGGAGAGAGTGGTCACGCGCCCGGTGATTCGTGTGGGATGTCTATGTACAGCTGTCAATTACCGTCGGATGTGATATGGGCTCCAACTGCAAGACCACCCCCACCATACTGA 864 0.588 MKGEYVEQQAKASDPPNMFSKLHHHPFPHHPFHLSRDSQTSEDDDTRSATATPTPNHPPKPSSADGSSIEVVRRPRGRPPGSKNKPRPPVIITRDPEPTMSSFILEVPGGTDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANQPAGAVPAVPNSFTISLAGPQGQIVGGLVAGSLLAAGTVFIVAASFNNPSYHRLPAEEDVRNSVSGGGGDGQSPPLSGGGGESGHAPGDSCGMSMYSCQLPSDVIWAPTARPPPPY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2501 287 ProSiteProfiles PPC domain profile profile. 97 238 IPR005175 -
Alju07g2501 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 229 - -
Alju07g2501 287 MobiDBLite consensus disorder prediction 1 97 - -
Alju07g2501 287 Gene3D - 100 235 - -
Alju07g2501 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 278 IPR014476 GO:0003680
Alju07g2501 287 CDD DUF296 103 217 IPR005175 -
Alju07g2501 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 219 IPR005175 -
Alju07g2501 287 MobiDBLite consensus disorder prediction 231 263 - -
Alju07g2501 287 PIRSF ESCAROLA 8 279 IPR014476 GO:0003680
Alju07g2501 287 FunFam AT-hook motif nuclear-localized protein 101 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2501 Alju-ChrAlju07 50813434 50814297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2501 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.068 2.67e-110 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2501 07 50813434 50814297 Alju07g2501 07 50813434 50814297 ECH