Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2499 ATGCTACCTTTCAGGAGTTTCTATGGGTTTGAGAGCTGGTTAGATCAGGGTGCGTGTTCTCAGGAACCTAGCTCCTCCATCAAGTCCATGGAATCGGATAAAGCGAAGCCAGTTCTGAAACTCATATCAAAGTCTGAGAGGAAATCAATGGAAGCATGCAAGAGCCATAGGGAAGCAGAGAGGAGACGCAGGCAGCGAATCAACACCCACCTCTCCACTCTACGTTCTCTCCTCCCTAACGCCGTAAAGTCGGATAAGGCCTCGTTACTGGCGGAGGTGGTCCGACACGTCAAAGACCTGAGGAAACAGGCCGATGACGTGGCGCGCCATCACGAAGGAGACTTGTCGGGCAGCACTATCAGCGGAGAATTCGGGTCGGATCCCGGAGACTCGGAGCAGTGGGCGTTCCCGGGAGAGTCGGACGAGGCAACTGTGAGTTACTGCGACGGAGGAGGGAAGAGGAAACTCATGAAAGCCACGCTCTGCTGCGAGGACCGGCCCAACCTGAACCGAGATCTAGATGAGGCGATCCGGTCGGTTCGGGCTAAGGCGGTGCGAGCCGAGATGATGACCATTGGTGGGCGGACCAAGAGCGTGGTGATTGTCCAGTGGACTGGTGGAGAGGAGGAGGAGGAAGAAGAGGTTGGGGCACTAGAACGGGCTTTGACGGCTGTTGTGGAGAATCGGGCCTTGGTTGGGCCTAGACTGGGTCGGATGTTGTTGGATCACAAACGGGCCCGACATTGTTACGGCTTACCTAATGAGGGCGAAAGCGGCTTCATGTTGAGAACTGCTGACATAAAGTGGGTGTTGATGTCGTGCTGGACAGAGGAAAAGATGGCGAGGCTAATCCGTGACCGCTCCAAAACTGGCTCACTTGTCCGATCAACGTTTGATCTTGTGCGTCCGTTTGTCCATGGAGACTCCTCTCTGTGCTCACCCTTATCTACCCCAAACAGCTTTTCTCTGGGTTTCTCAAGAACAACGCCTCGCCATAACTTCACGAAATGGGCAAGAAGTGAAGCAGCATTCTCACCTTCGATAAAGGAAAAGCCTGGAACCACGGTTGAAACTGATGATAAACAGGACTTATTTGGTTTGATGAAACAGAGGTTTCTGAGTTTCAAGCAGCAGAAATACATGAAAGAGTTGGAGCATTTTCAAGCTCTTGCTGAAGCTCAGTCTCCAAAGTTCATGGTAATAGCTTGTGCAGATTCTAGGGTATGCCCCTCTAACATTTTAGGATTTCAACCTGGAGATGCCTTTATGATACGTAACATCGCCAATCTTGTTCCTCCCATGAAGAATGGAGCAACTGAGTGTAATGCTGCTCTTGAGTTTGCTGTAACTACTCTCAAGGTTGAAAATATTTTAGTTATTGGCCATAGTAGTTGTGCTGGAATTGAAGCGTTGATGAATATACAAGATGATGTCGAATCAAGGAGCTTCATTAACAAATGGGTTGTTAATGGGAAAGTTGCCAAGTCGAGGACAAAAGCTGCCACAGCTCATCTAAGCTTTGGTCGGCAATGCAAATTCTGTGAGAAGGAGTCTGTAAACCAGTCACTATTGAACTTACTGAGTTACCCTTGGATACAAGAAAGTGTGAAAAAGGAGTTGCTTTGCCTTCATGGAGGATACTACGATTTTTCAAATTGCTCATTTGAGAAATGGACACTTGATTGGAGAGGATGCAATGTTGAAGACGAAGAAGGAGAACACAGTTATACAGTTAAAGACCAAGAATTTTGGTGTTGA 1758 0.4858 MLPFRSFYGFESWLDQGACSQEPSSSIKSMESDKAKPVLKLISKSERKSMEACKSHREAERRRRQRINTHLSTLRSLLPNAVKSDKASLLAEVVRHVKDLRKQADDVARHHEGDLSGSTISGEFGSDPGDSEQWAFPGESDEATVSYCDGGGKRKLMKATLCCEDRPNLNRDLDEAIRSVRAKAVRAEMMTIGGRTKSVVIVQWTGGEEEEEEEVGALERALTAVVENRALVGPRLGRMLLDHKRARHCYGLPNEGESGFMLRTADIKWVLMSCWTEEKMARLIRDRSKTGSLVRSTFDLVRPFVHGDSSLCSPLSTPNSFSLGFSRTTPRHNFTKWARSEAAFSPSIKEKPGTTVETDDKQDLFGLMKQRFLSFKQQKYMKELEHFQALAEAQSPKFMVIACADSRVCPSNILGFQPGDAFMIRNIANLVPPMKNGATECNAALEFAVTTLKVENILVIGHSSCAGIEALMNIQDDVESRSFINKWVVNGKVAKSRTKAATAHLSFGRQCKFCEKESVNQSLLNLLSYPWIQESVKKELLCLHGGYYDFSNCSFEKWTLDWRGCNVEDEEGEHSYTVKDQEFWC 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2499 585 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Alju07g2499 585 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 403 410 IPR015892 GO:0004089|GO:0008270|GO:0015976
Alju07g2499 585 Gene3D Carbonic anhydrase 355 564 IPR036874 GO:0004089|GO:0008270
Alju07g2499 585 Gene3D - 45 112 IPR036638 GO:0046983
Alju07g2499 585 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 55 109 IPR036638 GO:0046983
Alju07g2499 585 CDD beta_CA_cladeB 371 558 IPR045066 GO:0004089|GO:0008270
Alju07g2499 585 Pfam Carbonic anhydrase 399 552 IPR001765 GO:0004089|GO:0008270
Alju07g2499 585 Pfam Helix-loop-helix DNA-binding domain 53 100 IPR011598 GO:0046983
Alju07g2499 585 MobiDBLite consensus disorder prediction 107 138 - -
Alju07g2499 585 SUPERFAMILY beta-carbonic anhydrase, cab 360 563 IPR036874 GO:0004089|GO:0008270
Alju07g2499 585 PANTHER CARBONIC ANHYDRASE 351 562 IPR001765 GO:0004089|GO:0008270
Alju07g2499 585 Coils Coil 208 228 - -
Alju07g2499 585 SMART finulus 57 106 IPR011598 GO:0046983
Alju07g2499 585 FunFam Carbonic anhydrase 360 567 - -
Alju07g2499 585 SMART Pro_CA_2 391 559 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2499 Alju-ChrAlju07 50793904 50797623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2499 48 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.011 9.10e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g2499 Pro_CA 1.1e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2499 07 50793904 50797623 Alju07g2499 07 50793904 50797623 ECH