Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2495 ATGCATATTCACTTCGTTTCACTCGGGAATTCTGGTAACAATCAGGTTCAATGCAGCTGTCTCACGACATTAGAGCCTTCGATAATAGCGGATGCTGCACTTTTCATCATAAACCAATGGGCGTTGGTCGATTACATTTGGTTACCATCAATCTTTTGCCGCATGGTTTGCTATTTATTCGCTAGAATTGCTGTTCCTAGGCGTGATTCTTCAGCTCACCGTCTTTTAAGTAAAGTACATGCCCCGTTAAGGCCTGTTCCTACCAGATGTAATGTTTTATTGTGCCGTTCCATATTAATGCCGAGCGGAGGGAGTTGGACCCCACTAACGAAATCTGCTTCTGTTATCTTGAAAAGGTCATATGATGCTTTGCAAGGAAGCCCTGTCACTACTCAGTTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGCCTTGAACCTCTTATGCGTCTGTGCAGGATTATCTTTCTCCAAAGGAATGATAATACTTGGAAGAAAAGTAGTTCACGTGATATTATGACATCTTATTTTCAGCCTTTGCTGCTGTGGACTGGGGTTATGCTCCTCTGCAGGGCATTAGATCCACTAACCCTCCCATCAGAAGCCAGCCAGGCAGTGAAGCAAAGGCTGCTGAATTTTGTGAGATCTCTGTCAACTGTGCTCTCATTTGCTTACTGTTTTTCAAGCTTAATTCAACAAGCACAAAAATTCTTCATGGAGGCAAACGAATCCAATGATGCGAGAAATATGGGATTTGATTTTGCTGGGAAAGCTGTGTATACTGCTTTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCCGGTGGTTTGGGTACAGTACTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACAAAGATTGATGGATATGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACTCAGAGAAGTCATTGGCGTATCAAGACTCACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTTTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCATGTTGATACTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTTTGCGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTCATTAGTCATCATCGAGCTCGGTTAGCCACACCCATCCGCACAGTCCAGAAAATATACAGTGAGGCTGACTTGGAAAACATACCATTCGGTGACCCCATTTTTACTCGCTCCAGAGCAGCAGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGTGAAGATAGAACCAAGGCTCCTACTCGTTCAACACGTCCCAGTGAAGAAAAAGATGCCAAAATTGATGAAACATCGACATCTGATTCCAAAGATGACAATCTTGTCGCGACATCGACATCAACATCAACATCCATTTCAAACACCAGGGATAAATGTAAGTCAATCTCTGGAGCACAAGCTCAGAATATGGGTTCTGATAGTACTGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCTGTAGATGCTGGGAAGGGGCCTGCTGCCCTGGTAAATAAAGACCTTGCTCAAAGTATTGCCCCTGCAAATTCTTCGGCTTCTTCACATGAGTTTGCGGGAAGGGGAGAGACTACTTCTACATCTTTACAGGCGAAGCAGGACGAAGACAAATATGCTGTATCCTCCTCACCGGCCAGGCCTTCCTTGGAAGAAAATATTGTTCTTGGTGTTGCCCTTGAGGGCTCAAAACGTACTCTTCCAATTGACGAAGAAATGACTCCACCTCCCATCCCCACAGAGGCACAAGAATTTGCCGCCCAAAGACATGGAAATGGATCTTCTGGCAAGGATAAAAAGGATGGTCAATTTTCTACCAAGCAGCAGAGCGATTAA 2172 0.4355 MHIHFVSLGNSGNNQVQCSCLTTLEPSIIADAALFIINQWALVDYIWLPSIFCRMVCYLFARIAVPRRDSSAHRLLSKVHAPLRPVPTRCNVLLCRSILMPSGGSWTPLTKSASVILKRSYDALQGSPVTTQLIPALGVIAFAVCGLEPLMRLCRIIFLQRNDNTWKKSSSRDIMTSYFQPLLLWTGVMLLCRALDPLTLPSEASQAVKQRLLNFVRSLSTVLSFAYCFSSLIQQAQKFFMEANESNDARNMGFDFAGKAVYTALWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRSHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVDTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDPIFTRSRAAANRPFLLIEPPSKVNGEDRTKAPTRSTRPSEEKDAKIDETSTSDSKDDNLVATSTSTSTSISNTRDKCKSISGAQAQNMGSDSTVQKTSKTTQPKKESAVDAGKGPAALVNKDLAQSIAPANSSASSHEFAGRGETTSTSLQAKQDEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIDEEMTPPPIPTEAQEFAAQRHGNGSSGKDKKDGQFSTKQQSD 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2495 723 Gene3D - 317 370 IPR023408 -
Alju07g2495 723 MobiDBLite consensus disorder prediction 619 723 - -
Alju07g2495 723 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 68 717 IPR045042 -
Alju07g2495 723 MobiDBLite consensus disorder prediction 547 597 - -
Alju07g2495 723 SUPERFAMILY Sm-like ribonucleoproteins 302 372 IPR010920 -
Alju07g2495 723 MobiDBLite consensus disorder prediction 619 650 - -
Alju07g2495 723 MobiDBLite consensus disorder prediction 508 605 - -
Alju07g2495 723 Gene3D - 212 316 - -
Alju07g2495 723 MobiDBLite consensus disorder prediction 515 546 - -
Alju07g2495 723 Pfam Mechanosensitive ion channel 259 466 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2495 Alju-ChrAlju07 50736729 50743310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2495 82 715 Mechanosensitive Ion Channel Family AT5G10490 56.583 0.0 715