LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2490	ATGTTGGAAGATGATAAGAAGAACAAGAAGGTGGCTTTTAGCGAGCAAGACGCTACTGCTCTCTTAGTGAAGTATGATGCAACCACCGTTCTAACTTTACTTCAGGAATTGTCAAATTCAAATTATCCTGGGGGCAAGATTGATTGGAATGAGTTGGTAAAAAGTACAGCAACTGGGATATCAAATGCTCGAGAGTATCAGATGTTATGGCGTCATCTAGCGTATCGTGATGACTTGACTGAAAATCTGGAAGACGGGGCTGAACCTCTGGATGATGATAGTGAATTGGACTGTGAGATGGAAGCGGCACCCCCTATAAACAATGAGGCTGCATCAGAGGCTTCAGCTTGTGTGAAGGTTATGATAGCCTCTGGTTCACTTAGTGAAAGGGGTCCTAGTAGCTCAACAATTGAGGCTCCGATGACTATACATATTCCAAATTGTCATTCCTCTACAAATCCTGAAGAAAATATACAGCACTCAAACTCGATACAAGGAGCAAGTGTTATTTTTCCTGTTACTGTTCAGAGACAGACACTACCAACTGGATCTGTGACCGAAAGTGTAGAGGCCAAGGGAACATCTGGTGGCAAATTGTCTTCCAAAAGGAGAAGAAAAGCATGGTCAGAAGAAGAGGACAAGCAACTTCGAGAGCTTGTTCAGAAATGTGGTGAGGGAAATTGGGCAACAATGTCAAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGCTGGCCCAGAGGTGGAGCATTTTACGAAAGAAGGATGGCACTACAAATTCGGGAGCAAACTTGACCAGCTCGCAGTTTACTGCGGTACAGCTAGCAACTCGTCACTCGTTATCTTTAGCCCTTGACATGCCTTTAAAAAAATTAACTGCTCCTGGAACGACAGACACGGCTAGGGTGTCATTAAACGGATCAATTAAGAACCCTGTGCAACCTATCAACACTGCTGAAGTACCAACAGTTCAGAGCAGCTCTGTGCCACCTCAGCTTCCATCTCAACAAGCTGTGTTGGGTTCTTCTGCTTGCCCGGCAAATTCTTTAGTCCCTGAAAGAACAATGCTGAAGTCTAGTACAAGTGCTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGTTGGTGCACGTATTGTCTCCTCGACTGATATTTTGTCAGTGCAAAAGTCTACTCAGGACAGAAGCGCTGGACAAATTATGCCCTCAGGCAATTCTTCAATGAAGCGGTCTGCATCTGCTGGTTCTGTCATCAACCCTAAAGCTCTTGTAAATACATCCGTTTCTCCTAAAGCTCTTGCCACTGCACCTCCTCCCTGCACCAGGGCTGTTAAATCTATCTCCCCATCAGGTGATAAAACATCTAATGCTCACACGCTTCGCTCTGTGGTCAATAATCTTCCATTGGAGCAAGTTAATCCTAATCAAGAATCAAAAGTCTCTGATTCTAGTGTTGAACCAAAAGAGAGGGACCAAGTTGCTGAGGCACTAGTCACAGAAAATGTACCTAATGAGGAAGTTTTAGAGGTTAAACTAGTCTCACAAAGTCCAGGAGAATAA	1560	0.4423	MLEDDKKNKKVAFSEQDATALLVKYDATTVLTLLQELSNSNYPGGKIDWNELVKSTATGISNAREYQMLWRHLAYRDDLTENLEDGAEPLDDDSELDCEMEAAPPINNEAASEASACVKVMIASGSLSERGPSSSTIEAPMTIHIPNCHSSTNPEENIQHSNSIQGASVIFPVTVQRQTLPTGSVTESVEAKGTSGGKLSSKRRRKAWSEEEDKQLRELVQKCGEGNWATMSKGDDFPIKRSPTQLAQRWSILRKKDGTTNSGANLTSSQFTAVQLATRHSLSLALDMPLKKLTAPGTTDTARVSLNGSIKNPVQPINTAEVPTVQSSSVPPQLPSQQAVLGSSACPANSLVPERTMLKSSTSADAAVRATAVAVGARIVSSTDILSVQKSTQDRSAGQIMPSGNSSMKRSASAGSVINPKALVNTSVSPKALATAPPPCTRAVKSISPSGDKTSNAHTLRSVVNNLPLEQVNPNQESKVSDSSVEPKERDQVAEALVTENVPNEEVLEVKLVSQSPGE	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2490	519	MobiDBLite	consensus disorder prediction	430	501	-	-
	Alju07g2490	519	MobiDBLite	consensus disorder prediction	182	212	-	-
	Alju07g2490	519	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	200	258	IPR017930	-
	Alju07g2490	519	ProSiteProfiles	Myb-like domain profile.	200	254	IPR001005	-
	Alju07g2490	519	SMART	sant	204	256	IPR001005	-
	Alju07g2490	519	CDD	SANT_TRF	206	255	-	-
	Alju07g2490	519	MobiDBLite	consensus disorder prediction	388	414	-	-
	Alju07g2490	519	Gene3D	-	198	260	-	-
	Alju07g2490	519	MobiDBLite	consensus disorder prediction	447	481	-	-
	Alju07g2490	519	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	1	500	-	-
	Alju07g2490	519	SUPERFAMILY	Homeodomain-like	203	256	IPR009057	-
	Alju07g2490	519	Pfam	Myb-like DNA-binding domain	205	250	IPR001005	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Alju07g2490		Myb_DNA-binding	1.8e-09	CL0123

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju07g2490	07	50702890	50710848	Alju07g2490	07	50702890	50710848	ECH