Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2466 ATGGAGGTGTCAGAACATGATTTCTTGGAGGAATTAGTAGCTCTAAGAAGAGAAGCATGGGACACAATTCCAAGTCCAAATGAAGAAAACCAGTTCTTCTTCCCTAATAATGCTTATAATAATAGCAGTTTGGACTGTTTTGATCCAAACTCTCTTGCTTTTCTCCCAAATTCCTTCTCTGATCAACAGGGGCCTCAAAGCTACAACAACTACAATAGTAGCTTCAACGAAACCTACAACTCATTACTTGATGAGTTCTCAACACCCCAGATCATCGATTCATCACCACCCTATTATATATATACCACTGTTGATACTACTTCTTCACTTAGCACCCCTCCTTTTCTGGTTCAAGAAGAGAATAATTACCCCTTAAGGTCGTCCATGAATATTGAAGAAGAGGGTAATTTGTTTGGAGACCTCAAAACGACATGTAAGACAGAGCCCATGAGCCATTCTCCTGAAACAATAATGCCAGATTTCAACATGGGCACTTGTCATTTGGAGAGAAAGAATCGACCCAAGAAGCTGCTGGGACAGCCCTCCAAGAATCTAATGGCTGAGAGAAGAAGAAGAAAGAGGCTCAATGATCGTCTCTCCATGCTAAGATCTATTGTCCCCAAGATTAGTAAGATGGACAGAACATCTATACTTGGAGACACGATAGACTACGTGAAAGAACTTCTGGAGAAGATTAAAGATTTGCAGCAAGATATAGACTTGGATTCAAACATGGTGGGCCTTTTGAAGGATTATGCTAAACCAAATGAAATCATCATGAGAAATTTACCCAAGTTTGATGTGGAGCGAAGGAAAGTGGACACGAGGGTTGAAATATGCTGTTCAGGGAAGCCAGGGTTGTTGCTATCTACAGTGAACACCTTGGAAGCCTTTGGGCTTGAGATTCAGCAATGTGTTTTCAGCTGCTTCAATGATTTCACCATGCAGGCTTCTTGCTCAGAGGAATTGGAGCACAGGACAATAGTGGGCTCGGGAGATATAAAGCAAGCGTTATTTAGAAGAGCAGGATATGGAGGAAGATGTATGTGA 1050 0.4152 MEVSEHDFLEELVALRREAWDTIPSPNEENQFFFPNNAYNNSSLDCFDPNSLAFLPNSFSDQQGPQSYNNYNSSFNETYNSLLDEFSTPQIIDSSPPYYIYTTVDTTSSLSTPPFLVQEENNYPLRSSMNIEEEGNLFGDLKTTCKTEPMSHSPETIMPDFNMGTCHLERKNRPKKLLGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELLEKIKDLQQDIDLDSNMVGLLKDYAKPNEIIMRNLPKFDVERRKVDTRVEICCSGKPGLLLSTVNTLEAFGLEIQQCVFSCFNDFTMQASCSEELEHRTIVGSGDIKQALFRRAGYGGRCM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2466 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Alju07g2466 349 SMART finulus 185 234 IPR011598 GO:0046983
Alju07g2466 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 241 IPR036638 GO:0046983
Alju07g2466 349 Pfam Helix-loop-helix DNA-binding domain 185 228 IPR011598 GO:0046983
Alju07g2466 349 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 70 343 - -
Alju07g2466 349 Gene3D - 179 244 IPR036638 GO:0046983
Alju07g2466 349 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2466 Alju-ChrAlju07 50310552 50311976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2466 170 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.295 5.13e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g2466 HLH 9.5e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2466 07 50310552 50311976 Alju07g2466 07 50310552 50311976 ECH