Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2461 ATGGGAACAGGTTGGAGGCGAGCTTTTTGCACTCGTGACCCAGAATCTACCATACCCGATAAGCAGCAGAGAGGCACGAGTCCTAGCCCCAGTCCCAGAAGCTGTGTCCGATTGGGTTTTCTATCCGGCGGAAGCAACCCTTCCACGCCACGCTTGCAGCAGCAGCATTCTCAAGCTGTGTCTAGTCCTAGCCTGCGTTGCCCAACAGTTTCAGAAGCACCAGCAAACGTGAATGAGAGCCCCAGATTTCAGTGCAAAACTACTCCCAGGGCTTCCAAGTCGCCAAAAACCAGCTCTACCTCAAATCCCACATCTCCCCGCACTCCTTTGAAGTTGTCTCTCTTCAGGAATAGCTTCAAATTCCGTAGTAGTTGTGGAATCTGTTTGAATAGCGTAAAAACCGGTCAGGGAACGGCCATTTACACTGCGGAATGTACTCACGCCTTTCACTTTCCCTGTATCGCCGATTATGTACGCAAACATGGAAGCCTCGTCTGCCCGGTCTGCAACGCTGCCTGGAAAGACGTGCCTCTCCTAGCCGCACACAAGAACCACGCCACCGAATCCGCCGAAAAGAACGACATCGTCGTGGTTGACAAGAGCGTTGTAAAACCAAATGCCACCCAGACGAGTAAGGAAGACTCATCCCCAGTTTTCAGAGTCAAGCCTATTGAATCGCCCCAACAATTACCAAAAAAACAGCCAAAGCAACCTGATTCATACAGGTCCTACGACGATGATGAGCCACTTCTATCTCCCACAGCCGGTGGTGGTCGAATCATTCCAATACCTGAAGCCGACGAGGACGCCGAAGAAGACGACGTTGAAGAATTCCAGGGATTTTTTGTCAACGCAAAATCTTCATCCTCAATCAAATCTTACTCTGATGACTTGCAAATAAGCGACAAGGATTCCAGGAACGTTCAGGTGAAGTTGATCCCCGAGTGTGCCGTAGTGTCAGTCTCTCGAATCCACGAGACTTACGCTTTGATTCTGAAAGTGAAGGCTCCTCCGCCATCACCTCCGGCGCGTAGTGGCAATAACTGTACGACGCCGCGTCTTGGTCAGTCGCAGCGAGCTCCCATAGATCTCGTAACGGTTCTTGACGTTGGTGGGAGCATGACAGGCGCGAAGCTGCACATGCTTAAGCGCGCGATGCGCTTGGTTATTTCCTCACTCAGCCCAGCCGACAGGCTTTCCATAGTGGCTTTCTCGGCCACTTCCAAGCGGCTCTTACCTTTGAGAAGAATGACGGCTCAAGGACAGCGTGTGGCTCGGCGTATCATCGATCTGCTCGTCTCGGGCCATGGGTCTTGTGTGGGCGATGCTCTGAGAAAAGCAACCAAAGTGCTCGAGGATCGCAGGGAGAGAAACCCGGTTGCTAGTGTAATGCTCCTATCGGACGGTCAGGATGAACGAGTCCAAAGCAGTAACATCCACAACCAACGAAAGTCCTCGACCCACTCGTCCTCGACCCGATTCGCCCACATCGAGATTCCGGTTCATGCGTTCGGGTTCGGGAAAAAGAGCGGCTTCAGCCACGAGCCGGCCGAGGATGCATTTGCCAAGTGCGTTGGCGGGTTATTGAGTGTGGTTATACAAGATTTGAGAGTTCAACTCGGCTTCCAATCCGGGTCATCGACGGCGGAAATCAGCGGCATCTATTTATGTGGCGGTCGAGCTACAGCACTGAGCTCAGGCTGCGTACGGCTCGGCGACTTGTACGCCGAGGAAGAGAGGGAGTTACTGGTGGAGCTGAGAGTTCCAACGTCGGCTTTGGGGGCCCACCACGTGATGACGGTACGGTGCTTGTATAAGGACCCTGCTTCTCAAGAGATCGTATCTAGTAGGGAACAGGCCCTACTGGTTCCGCCTCCTCAGGGCACGCGAAGCGAACACTTGAAGAATTTCTTCATAGCCACCCGAGCCATATCCGAGTCTCGCCGGCTCGTTGACTACAACGACTTCACGAATGCTCATGATTTACTGGCTTCGGCTCGCGCGCTCTTGATGCAGGCTAAGTCGAGCGCGGCTGAGGAGCATGTGCGCGCTTTGGAAGCTGAGCTGGCAGAACTTCATTGGCGCAGTCAAAACCCGATGGATCAGCAGACGATGACGCAGGAACGAAGGAGAGGGCACGAGAGGGAGATGACGAGCATGGTGGATGATAATGGGGAGCCGCTCACGCCGACATCAGCATGGAGAGCCGCTGAGAAGCTGGCTAAGGTGGCCATCATGAAGAAGTCATTGAACAGAGCCAGCGATTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2295 0.5346 MGTGWRRAFCTRDPESTIPDKQQRGTSPSPSPRSCVRLGFLSGGSNPSTPRLQQQHSQAVSSPSLRCPTVSEAPANVNESPRFQCKTTPRASKSPKTSSTSNPTSPRTPLKLSLFRNSFKFRSSCGICLNSVKTGQGTAIYTAECTHAFHFPCIADYVRKHGSLVCPVCNAAWKDVPLLAAHKNHATESAEKNDIVVVDKSVVKPNATQTSKEDSSPVFRVKPIESPQQLPKKQPKQPDSYRSYDDDEPLLSPTAGGGRIIPIPEADEDAEEDDVEEFQGFFVNAKSSSSIKSYSDDLQISDKDSRNVQVKLIPECAVVSVSRIHETYALILKVKAPPPSPPARSGNNCTTPRLGQSQRAPIDLVTVLDVGGSMTGAKLHMLKRAMRLVISSLSPADRLSIVAFSATSKRLLPLRRMTAQGQRVARRIIDLLVSGHGSCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQSSNIHNQRKSSTHSSSTRFAHIEIPVHAFGFGKKSGFSHEPAEDAFAKCVGGLLSVVIQDLRVQLGFQSGSSTAEISGIYLCGGRATALSSGCVRLGDLYAEEERELLVELRVPTSALGAHHVMTVRCLYKDPASQEIVSSREQALLVPPPQGTRSEHLKNFFIATRAISESRRLVDYNDFTNAHDLLASARALLMQAKSSAAEEHVRALEAELAELHWRSQNPMDQQTMTQERRRGHEREMTSMVDDNGEPLTPTSAWRAAEKLAKVAIMKKSLNRASDLHGFENARF 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2461 764 CDD RING-H2_WAVH2 122 175 - -
Alju07g2461 764 MobiDBLite consensus disorder prediction 699 729 - -
Alju07g2461 764 ProSiteProfiles Zinc finger RING-type profile. 125 170 IPR001841 -
Alju07g2461 764 SUPERFAMILY vWA-like 361 533 IPR036465 -
Alju07g2461 764 ProSiteProfiles VWFA domain profile. 363 507 IPR002035 -
Alju07g2461 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 180 IPR013083 -
Alju07g2461 764 CDD vWA_C3HC4_type 362 532 - -
Alju07g2461 764 Gene3D von Willebrand factor, type A domain 363 527 IPR036465 -
Alju07g2461 764 SUPERFAMILY RING/U-box 124 175 - -
Alju07g2461 764 SMART VWA_4 361 546 IPR002035 -
Alju07g2461 764 MobiDBLite consensus disorder prediction 1 110 - -
Alju07g2461 764 MobiDBLite consensus disorder prediction 206 260 - -
Alju07g2461 764 Pfam RING-like zinc finger 125 154 IPR001841 -
Alju07g2461 764 MobiDBLite consensus disorder prediction 41 110 - -
Alju07g2461 764 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 123 759 - -
Alju07g2461 764 Pfam von Willebrand factor type A domain 363 508 IPR002035 -
Alju07g2461 764 SMART ring_2 125 169 IPR001841 -
Alju07g2461 764 MobiDBLite consensus disorder prediction 706 721 - -
Alju07g2461 764 FunFam Probable E3 ubiquitin-protein ligase EDA40 363 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2461 Alju-ChrAlju07 50269268 50271672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2461 125 175 C3H Transcription Factor Family AT1G74410 43.137 9.33e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2461 07 50269268 50271672 Alju07g2461 07 50269268 50271672 ECH