Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2456 ATGAAGCCAACCTCACCAAACCTCGTCTTCTCTGTCTCTCTCCCTCTCTCTGTATTCTTCGTCATGTTACTTCCCTCCACCTTCCCGCGTCTCTCTTCCCTCCTTCCACTCCTCTGTTTCATTTCAATCCTCGCCGGAGTCAACTCCGACGAACCAGACCATCAGCTTCTTCTAAACCTCAAAGCAGCTATTCAGACATCAAATCCCACCGTGTTTGACTCGTGGAACGATTCCAACTCCGTATGCAGATTCAATGGAATCACGTGCAATTCAAGCGGTTCGGTGACTGAAATCAATCTCTCCAATCACATGCTCTCTGGGGTTCTTCCTTTCGATTCCATTTGCCAGCTCCAATCACTCGAGAAGCTCTCATTTGGGTTCAATTCATTGTATGGAAACATTTCCAACGATTTGAGCAACTGCGTCAAATTGAAGTACTTGGACTTGGGCAATAATCTTTTCTCGGGAACGTTCCCTGACATTTCAACTCTCACTCAATTGAAGTATTTGTATTTAAATCAGAGCGGCTTTTCTGGAACATTCCCATGGAAGTCGCTGCAAAATATGGCGAATCTTGAGGTGTTAAGCGTCGGAGATAACCCCTTTGACCTTACTCCTTTCCCTACAGAAGTTGTAAAGCTCAAGAATTTGAAATGGTTATATATGTCAAATTGCACTCTTGGTGGGAAAATACCTACAGGGATCGGTAACCTTACAGAGCTCATAAACTTGGAATTTTCAGACAACTTTATATCTGGTGAGATTCCTTCGGAGATCGGGAAGCTTCAGAATCTATGGCAGCTTGAGATGTACAACAATTCGTTCACTGGGAAGCTTCCATATGGGTTAAGAAACCTGACAAAGTTAGAGTTCTTTGACGCGTCAATGAATAGTCTTGCAGGCAATCTTTCTGAATTGAGGTTCTTGAGTAATCTCGTTTCTCTGCAATTATTTGAAAACGAATTCTCCGGTGAAATCCCGCCGGAGTTTGGTGAATTCAGAAAGCTTGTTAACTTATCGTTATACAGAAACAGCTTGACTGGTCCTATTCCTCAAAAGATTGGATTTTGGGCTGAGTTTGATTACATCGATGTGTCCGAGAATTTCTTAACTGGTCCTATTCCTCCAGATATGTGCAAACAGGGGAAGATGAACGCGCTGCTCGTTCTTCAGAACAAGCTCACTGGAGAAATTCCGGCCACCTATTCAAACTGTTTATCTCTGCGTCGATTCAGAGTGAGCAATAATTCTCTCTCCGGTGTCATACCTCCTGGAATTTGGGGGTTGCCAAAGGTAGAAATTATCGATATTGAATTGAATCGTTTGGGAGGTTCAATTACTTCAGATATCAAGAATGCGAAGACTCTGGCTCAAATATTCGCGAGTCAAAACCTCTTATCCGGTGAGATACCAGAAGAGATTTCAAAAGCTACCTCCTTGGTGACAGTTGACTTGAGCGAGAATCAAATTTCTGGGAAAATTCCGACAAGTGTCGGTGAGCTTAAACAACTAAGCAGTTTAAGTTTACAGAGCAACAAGTTATTTGGTTCAATCCCAGATTCTCTGGGTTCATGTGTATCCCTCAGCGATATCAACCTGTCACAAAATTCACTATCGGAAAAAATGCCTTCTTCTCTGGGCTTTTTACCAGCTCTCAATTCTCTGAACCTGTCAAGAAATGAACTTGCCGGTGAGATTCCGGCGAGTTTTACTCGTCTCCGATTGAGCCTCTTTGATTTATCAAACAACAAATTGGCAGGCCCAATTCCACTGAGTCTGTCTTTTCAAGCTTATAACGGAAGCCTTAATGGAAACTCCGATCTCTGCACAATGGACGTCGACGTCACCTCCTTCAAGCGTTGCTCTGTACATTCCAGCAATTCCAGACATTTCCGAACACTTCTGGTTTGCTTCTCAATAGGCTTAATCTTGCTTCTCCTTTGTCTAAGCCTTTACATGCAACTAAAGAAGAAGGAGAACTATCGAGAACGTTCTCTAAAGGAAGAATCCTGGGATATAAAATCCTTCCACGTGCTAAGCTTCACAGAGGACGAGATTCTAGATTCGATCAAGCAAGAGAATCTCATAGGAAAAGGAGGCTCCGGGAACGTGTACAGAGTCACTCTCTCCAACGGGAAAGACCTCGCCGTCAAGCACATATGGAACACCGACACCAGCGGCCGGAAAAGGAGCCGGAGCAGTGCTCCGATGATCGGAAAACGTGGGGGGGAATCAAAGGAATTTGACGCCGAAGTTCAGGCACTGAGCTCAATAAGGCACGTGAATGTGGTGAAACTATATTGCAGCATAACAAGCGAGGATTCAAATCTGTTGGTGTGCGAATATTTGCCAAATGGGAGTTTGTGGGATATGCTTCACACGAACAAGAAGATGGAGCTTGATTGGGAGACAAGGTACGAGATTGCCGTAGGAGCAGCGAAAGGATTGGAGTACCTTCATCATGGGTGCGAGAGGCCTGTGATTCACAGGGACGTCAAGTCGAGTAACATTTTGTTGGATGAGTTTTTGAAGCCCAGAATTGCTGATTTTGGATTAGCTAAGATTGTTCAAGCCAACGTTGGCAAAGATTCCACTCATCTAGTTGCTGGAACTCACGGCTATATTGCCCCTGAATATGGGTACACATACAAGGTGAATGAGAAGAGCGATGTTTATAGTTTTGGAGTGGTGCTAATGGAGCTAGTGACGGGGAAGAGGCCAATAGAGCCGGAATTTGGGGAGAGGGAAGACATAGTGAACTGGGTGTGCAGCAAAGTGCAGCAAGAGAACAAGGAGAAAATAATGGCAATGGTGGACTCAAGAATCGCAGATGTTTACAGAGAGGAGGCAATGAAGGTGATGAGGATAGCTATTATGTGCACAGCCAGGGTTCCAGCAGTGAGACCTACCATGAGAAGTGTGGTTCATATGCTGGAGGATGCTGGGCCTTGTAAGTTGGTGGGAATTGTGGTCACCAAAGATGAGAAAGTGCAGGTCCATGAGGCTGCAAAGCTTCCATAA 3021 0.4459 MKPTSPNLVFSVSLPLSVFFVMLLPSTFPRLSSLLPLLCFISILAGVNSDEPDHQLLLNLKAAIQTSNPTVFDSWNDSNSVCRFNGITCNSSGSVTEINLSNHMLSGVLPFDSICQLQSLEKLSFGFNSLYGNISNDLSNCVKLKYLDLGNNLFSGTFPDISTLTQLKYLYLNQSGFSGTFPWKSLQNMANLEVLSVGDNPFDLTPFPTEVVKLKNLKWLYMSNCTLGGKIPTGIGNLTELINLEFSDNFISGEIPSEIGKLQNLWQLEMYNNSFTGKLPYGLRNLTKLEFFDASMNSLAGNLSELRFLSNLVSLQLFENEFSGEIPPEFGEFRKLVNLSLYRNSLTGPIPQKIGFWAEFDYIDVSENFLTGPIPPDMCKQGKMNALLVLQNKLTGEIPATYSNCLSLRRFRVSNNSLSGVIPPGIWGLPKVEIIDIELNRLGGSITSDIKNAKTLAQIFASQNLLSGEIPEEISKATSLVTVDLSENQISGKIPTSVGELKQLSSLSLQSNKLFGSIPDSLGSCVSLSDINLSQNSLSEKMPSSLGFLPALNSLNLSRNELAGEIPASFTRLRLSLFDLSNNKLAGPIPLSLSFQAYNGSLNGNSDLCTMDVDVTSFKRCSVHSSNSRHFRTLLVCFSIGLILLLLCLSLYMQLKKKENYRERSLKEESWDIKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVTLSNGKDLAVKHIWNTDTSGRKRSRSSAPMIGKRGGESKEFDAEVQALSSIRHVNVVKLYCSITSEDSNLLVCEYLPNGSLWDMLHTNKKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHLVAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEPEFGEREDIVNWVCSKVQQENKEKIMAMVDSRIADVYREEAMKVMRIAIMCTARVPAVRPTMRSVVHMLEDAGPCKLVGIVVTKDEKVQVHEAAKLP 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2456 1006 FunFam Receptor-like protein kinase HAIKU2 673 782 - -
Alju07g2456 1006 Pfam Protein kinase domain 692 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2456 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Alju07g2456 1006 ProSiteProfiles Protein kinase domain profile. 690 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2456 1006 SUPERFAMILY L domain-like 305 635 - -
Alju07g2456 1006 FunFam Leucine-rich repeat receptor-like protein kinase TDR 306 623 - -
Alju07g2456 1006 Gene3D Ribonuclease Inhibitor 383 495 IPR032675 -
Alju07g2456 1006 Gene3D Phosphorylase Kinase; domain 1 674 782 - -
Alju07g2456 1006 SMART serkin_6 690 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2456 1006 FunFam Leucine-rich receptor-like protein kinase family protein 208 305 - -
Alju07g2456 1006 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Alju07g2456 1006 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 43 978 - -
Alju07g2456 1006 Gene3D Ribonuclease Inhibitor 52 160 IPR032675 -
Alju07g2456 1006 FunFam Probable inactive receptor kinase RLK902 50 207 - -
Alju07g2456 1006 Gene3D Ribonuclease Inhibitor 161 382 IPR032675 -
Alju07g2456 1006 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
Alju07g2456 1006 SUPERFAMILY Protein kinase-like (PK-like) 680 978 IPR011009 -
Alju07g2456 1006 Gene3D Transferase(Phosphotransferase) domain 1 783 986 - -
Alju07g2456 1006 Gene3D Ribonuclease Inhibitor 496 617 IPR032675 -
Alju07g2456 1006 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524
Alju07g2456 1006 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 783 995 - -
Alju07g2456 1006 SUPERFAMILY L domain-like 84 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2456 Alju-ChrAlju07 50203188 50206474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2456 28 1001 Receptor kinase-like Gene Family AT1G09970 63.432 0.0 1214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju07g2456 Pkinase 7.6e-44 CL0016