Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2415 ATGTACGGGATGATGGCGGTGAGCTCGGCTTGCAAAGATGGGAGCAAGGTGGCGATGGATAACGGCAAGTACGTGCGTTACACACCGGAGCAGGTCGAGGCTCTGGAGAGGCTCTATCATGAATGCCCCAAACCCAGTTCCATGCGTCGTCAGCAGCTTATCCGAGAGTGTCCCATTCTCTCTAACATCGAGCCCAAACAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGAAAAGAATCTTCACGCCTGCAAGCTGTAAACAGAAAACTGACGGCTATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCCCAGCTGGTTTACGAGAACAGCTTTTTCCGCCAACAGAATACGACTCTGGCAACGACGGACACAAGTTGCGAGTCGGTGGTTACGAGCGGTCAGCACCATGTGACACCTCAGCATCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCGGAGGAGACTCTTGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGTATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCCCGCGCATGCGGCCTTGTGGGTTTGGAACCTACGAGGGTTGCTGAAATCCTTAAAGATCGGCCCTCATGGTGTCGTGACTGCCGAGCTGTGGATGTTCTAAATGCGATGACCACAGGAAATGGAGGAACCATTGAACTGCTTTACATGCAGTTGTATGCCCCAACAACTTTGGCTCCAGCTCGTGACTTCTGGCTGCTGCGTTACACTTCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCACTTAACAACACTCAGAATGGCCCCACTATGCCACCAGCGCAGCATTTTGTGAGAGCAGACATGCTCCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGATCACATCAACTTAGAGCCTTGGAGTGTACCTGAAGTGTTACGCCCATTATATGAGTCTTCAACGTTGCTTGCTCAAAAGACAGCCATGGCGGCTTTACGTCACCTGAGGCAAATCTCTCAAGAAGTTTCTCAGCCAAATGTCACCGGATGGGGACGAAGGCCTGCAGCTTTGCGAGCACTGAGCCAGCGTTTGAGCAGGGGCTTCAATGAAGCTGTCAATGGATTTGCAGACGATGGCTGGTCCATGTTGGAAAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCTCCTAGCAAGACCATGGGAGTAAATATTGGTTACAACAATGGGTTTCTTTCGATGAGCAGTTCCGTGCTATGTGCAAAAGCATCCATGTTGTTACAGAATGTCCCTCCTGCAATTCTTCTTAGATTCTTGCGGGAGCATCGATCGGAGTGGGCAGATAGCAATATTGATGCTTACTCAGCCGCTGCCATCAAAGCTGGTCCCTGCACCTTGCCTGGGGTTCGAGCAGGAGGTTTTGGTGGTCAGATTATTCTTCCACTGGCGCACACAATTGAGAATGAAGAGTTTATGGAGGTCATCAAGCTTGAAAGTATGGGATACTATAGAGAAGACATGACTATTCCGGGCGATATTTTCCTCTTGCAACTTTGTAGTGGAGTAGATGAGCGTGCTGCTGGCACCTGTGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCTCCCATTTTACCTTCCGGTTTTCGCATCATGCCTCTTGATTCAGGCATGGATGCTGCTACTCCAAACCGAACACTTGACCTTGCTTCTGCTCTTGACGTTGGAACCACTGGAAACAAATCAGCTGGTGATAATGTTGGTCAATCTGGGAGCACAAAATCTGTGATGACAATAGCATTTCAGTTTGCATTTGAAGTCCATCTTCAAGATAGTGTAGCAGCTATGGCTAGGCAGTATGTTCGGAGTATTATTGCTTCTGTTCAAAGGGTAGCATTGGCACTATCCCCTTCCCACTTTGGTTCCCAAAACGGTCTTCGCCCTCCACCTGGCACTCCTGAGGCACAAACACTTGCTCAGTGGATCTGTAATAGCCATAGGAGCTATCTAGGGGTAGAACTACTAAAATGTGAAGGCAGTGAATCCATTCTCAATTCCCTTTGGCATCACTCTGATGCAGTCTTGTGTTGCTCGTTAAAGGCTTTGCCGGTTTTTACTTTTGCAAATCAAGCGGGACTTGACATGCTTGAGACAACTTTGGTTGCTCTTCAAGACATCACTCTTGATAAAATTTTTGACGAGAATGGGAAGAAAACCCTCTTCTCTGAGTTGCCCCAGATAATGCAGCAGGGCTTTATGTGTATGCAAGGAGGTATCTGCTTGTCCAGCATGGGGAGGCCAGTGTCTTATGAAAGAGCGGTTGCATGGAAAGTAATGAACGAAGAAGAAACGGCCCATTGCATTTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2523 0.4816 MYGMMAVSSACKDGSKVAMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQNTTLATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDVLNAMTTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADMLPSGYLIRPCEGGGSIIHIVDHINLEPWSVPEVLRPLYESSTLLAQKTAMAALRHLRQISQEVSQPNVTGWGRRPAALRALSQRLSRGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKTMGVNIGYNNGFLSMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQIILPLAHTIENEEFMEVIKLESMGYYREDMTIPGDIFLLQLCSGVDERAAGTCAELIFAPIDASFSDDAPILPSGFRIMPLDSGMDAATPNRTLDLASALDVGTTGNKSAGDNVGQSGSTKSVMTIAFQFAFEVHLQDSVAAMARQYVRSIIASVQRVALALSPSHFGSQNGLRPPPGTPEAQTLAQWICNSHRSYLGVELLKCEGSESILNSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLDKIFDENGKKTLFSELPQIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVMNEEETAHCICFMFINWSFV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2415 840 Pfam START domain 165 373 IPR002913 GO:0008289
Alju07g2415 840 FunFam Homeobox-leucine zipper protein REVOLUTA 23 78 - -
Alju07g2415 840 SUPERFAMILY Homeodomain-like 22 84 IPR009057 -
Alju07g2415 840 CDD homeodomain 23 83 IPR001356 GO:0003677
Alju07g2415 840 CDD bZIP 75 114 - -
Alju07g2415 840 Pfam Homeodomain 23 81 IPR001356 GO:0003677
Alju07g2415 840 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Alju07g2415 840 Gene3D - 14 89 - -
Alju07g2415 840 ProSiteProfiles 'Homeobox' domain profile. 18 82 IPR001356 GO:0003677
Alju07g2415 840 Pfam MEKHLA domain 699 839 IPR013978 -
Alju07g2415 840 SUPERFAMILY Bet v1-like 164 376 - -
Alju07g2415 840 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 840 IPR044830 GO:0003700
Alju07g2415 840 Coils Coil 88 119 - -
Alju07g2415 840 Gene3D - 199 381 IPR023393 -
Alju07g2415 840 SMART HOX_1 20 86 IPR001356 GO:0003677
Alju07g2415 840 CDD START_ArGLABRA2_like 159 374 - -
Alju07g2415 840 SMART START_1 164 374 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2415 Alju-ChrAlju07 49882937 49889744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2415 19 840 Homeobox Transcription Factor Family AT4G32880 81.280 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju07g2415 START 5.9e-53 CL0209