Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2410 ATGAGTGTTGAACCCCAGAATTCTGAAGCAGAGAGCAGCTCAAACTCATTCTCCTCTCCACCCACTTCACCATCATCACCTCCTTCAAGCAGGGCTCTTAAAAACTTTGTTACGCAGGGGAAATCTCAGGACCCAGAATCCAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCTGCGTATCGTGGGGTTCGTATGCGTAGTTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCACGCAAGAAATCTCGCATATGGCTGGGTACATTCTCAACCCCTGAAATGGCCGCCAGGGCACACGACGTCGCTGCGCTGAGCATCAAAGGGAACTCTGCCATTCTCAATTTCCCTCAACTAGCAAACTCTCTGCCCCGCCCTGCCTCTGTCTCTCCCCGTGATATTCAGGCCGCCGCAGCAAAAGCAGCTCAAATGGATCGGTTTGACTCGCCGTCGTCATCATCGGCGCCGTTGTCGTCGTCGTCGTCGTCATCATCTTCGGTTTCGACAATAGAAATGTGCAGTGGTTCGGAGGAATTGAGCGAAATCATAGAGCTGCCAAGGCTGGAAACAAGTGAAGAGACGTGCGAGTTTAGGAAGGAATTTGTGTTCGTGGACTCTTTATCTGACGGGTGGATGTATCAGCCACCATGGTTACAGAGCATGGAAGATTGTAACGTTTACGTCGCCGATCAGGTAGCAGAGGGTGGAATCATAAATAACCTTGATAGTTTGCTCTGGAATTACTGA 750 0.4987 MSVEPQNSEAESSSNSFSSPPTSPSSPPSSRALKNFVTQGKSQDPESKKIKRIRDSNKHPAYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPQLANSLPRPASVSPRDIQAAAAKAAQMDRFDSPSSSSAPLSSSSSSSSSVSTIEMCSGSEELSEIIELPRLETSEETCEFRKEFVFVDSLSDGWMYQPPWLQSMEDCNVYVADQVAEGGIINNLDSLLWNY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2410 249 MobiDBLite consensus disorder prediction 147 169 - -
Alju07g2410 249 MobiDBLite consensus disorder prediction 44 62 - -
Alju07g2410 249 MobiDBLite consensus disorder prediction 1 20 - -
Alju07g2410 249 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 193 - -
Alju07g2410 249 CDD AP2 62 118 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 MobiDBLite consensus disorder prediction 28 43 - -
Alju07g2410 249 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Alju07g2410 249 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Alju07g2410 249 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Alju07g2410 249 MobiDBLite consensus disorder prediction 126 169 - -
Alju07g2410 249 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Alju07g2410 249 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2410 Alju-ChrAlju07 49831011 49831760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2410 48 224 AP2-EREBP Transcription Factor Family AT5G11590 65.027 7.19e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju07g2410 AP2 2e-13 CL0081