Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2403 ATGTTGCAGGATCGTCTGCAGAAGATGTGTGAGAACTTGTGTGGCCATTCATTATTTGTGAAATGTTTGGTACTATTCTTTATGTTTTCTTCTTTCCTTCCGAATGCTGAAGCCCGAGACAAAGGACAGATCCATCAAGTAATCAAAGCACTCCCTGTGTTGGAGTTTTCTTTGCTCAAAGGATCAAAAGAAGGCCTAGGATATGTTGTTTCCCTGTCGAAATTTGAAAACAGAGAAACTCTGAGGTTGCTCCCAAAGTGCAAGCTTGCTTTCCACATGAATTGCATAGACACGTGGCTTGAAGGTCACTCTACTTGCCCTCTCTGTAGGTGCAGGGCACACCCACAGGACATCAAGAGCTTCACTTCAATCAGCGCAAGCTTCCTGAGAGTCCCTTCCAATTTAACAGAGGAACCAAATCTTGAAATCTTTGTGCAGAGGGAGCAAAAATCCCCTCAAGGGTCATTGAGGATCAACTCTGAGAGGGGCTTATGGGACGTGGAGGAGGGCAAGAAGGAAGAACAACCGCTCATTGACAGTGGTGGAAATCTCGAAATTATGCACAAGTTCAATCACAGGATAGTTATCTCAGGTTTTGTTACGAGGAGTAGGTGGAGTGATGTTACTGCGACGGATTTGCTATTCTTTTTAAACTCTGAAATGCTCAGTGTTGCGTCGAGAAAAAGGTTCCTTGCTTCAGAATCCGCCAACGGTGAATTGTCAAACCTTTCATATACTTCCAAAGAGGAACAAAACTAG 759 0.4401 MLQDRLQKMCENLCGHSLFVKCLVLFFMFSSFLPNAEARDKGQIHQVIKALPVLEFSLLKGSKEGLGYVVSLSKFENRETLRLLPKCKLAFHMNCIDTWLEGHSTCPLCRCRAHPQDIKSFTSISASFLRVPSNLTEEPNLEIFVQREQKSPQGSLRINSERGLWDVEEGKKEEQPLIDSGGNLEIMHKFNHRIVISGFVTRSRWSDVTATDLLFFLNSEMLSVASRKRFLASESANGELSNLSYTSKEEQN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2403 252 Pfam Ring finger domain 72 110 IPR001841 -
Alju07g2403 252 SUPERFAMILY RING/U-box 73 116 - -
Alju07g2403 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 119 IPR013083 -
Alju07g2403 252 CDD RING-H2_EL5-like 69 110 - -
Alju07g2403 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 36 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2403 Alju-ChrAlju07 49748906 49749839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2403 33 230 C3H Transcription Factor Family AT2G20030 44.660 2.86e-46 157