Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2402 ATGTTTCATTTCTTGGGGACCTCTGACGCAATTATTAAAGTTTGTACTTTAGTTTTGCATGTTGTATATATAACGAGAAGCCAGGCATGGAATATACCAACCCCACCACTGCCTAGCTATCTCCATCCAGCCATGCCGAAGATAGCTCTCGGCACCTCTCGGGAGGCCACCCAGCCTGACTGCCTTCAGGCCCTCGTCATTGAGTTTGTCACCACCTTCCTCTTCGTCTTCGCCGGTGTTGGTTCCGCCATGGCCACCGAAAAGCTAGGAGCAGACGCACTGGTCGGGCTGTTTGCCGTGGCGGTGGCACACGCACTTGTGGTGGCCACCATGATATCGGCCGGCCACATTTCCGGAGGCCACCTCAACCCGGCCGTCACGCTGGGCCTCCTCTTGGGTGGCCACATCACCCTCTTCCGTTCCATCCTTTATTGGATCGATCAATTGCTCGCATCCTCCCTTGCGTGTTACCTTCTGTACTACCTCTCCGGCGGACAGGCAACTCCGGTGCACACGCTGGCAAGTGGAGTGGGATACGCTCAGGGAGTGATATGGGAGATCATCCTCACGTTTTCATTGTTGTTCTCTGTGTACGCGACTATGGTGGATCCTAAGAAGGGAGCCATTAACGGGCTTGGGCCCACCCTTGTTGGGTTTGTTGTGGGCGCTAACATCCTGGCGGGAGGGGCCTTCTCTGCTGCTTCCATGAACCCAGCGAGATCCTTCGGGCCTGCTTTGGTCAGTGGGAATTGGACGGATCACTGGGTGTACTGGGTCGGCCCACTCATTGGGGGTGGCTTTGCAGGCTTCATGTATGAGACCTTCTTCATCAACAGATCCCATGTCCCACTTCCTCAAGATGAAGAGAGTCGCTAG 876 0.5525 MFHFLGTSDAIIKVCTLVLHVVYITRSQAWNIPTPPLPSYLHPAMPKIALGTSREATQPDCLQALVIEFVTTFLFVFAGVGSAMATEKLGADALVGLFAVAVAHALVVATMISAGHISGGHLNPAVTLGLLLGGHITLFRSILYWIDQLLASSLACYLLYYLSGGQATPVHTLASGVGYAQGVIWEIILTFSLLFSVYATMVDPKKGAINGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGFAGFMYETFFINRSHVPLPQDEESR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2402 291 ProSitePatterns MIP family signature. 121 129 IPR022357 -
Alju07g2402 291 PANTHER AQUAPORIN-8 48 281 IPR034294 -
Alju07g2402 291 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 Gene3D Glycerol uptake facilitator protein. 46 287 IPR023271 -
Alju07g2402 291 SUPERFAMILY Aquaporin-like 55 285 IPR023271 -
Alju07g2402 291 CDD MIP 63 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju07g2402 291 FunFam Probable aquaporin TIP1-1 46 288 - -
Alju07g2402 291 Pfam Major intrinsic protein 56 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2402 Alju-ChrAlju07 49746845 49747899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2402 45 289 Major Intrinsic Protein MIP AT2G25810 78.367 2.83e-132 373