Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2399 ATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGTCGGAAGATAGGTAGCGGATCCTTCGGCGAAATTTATATTGCTGCCGATATTCAGACATCTGAGATTGTGGCCGTGAAGATGGAGAGCAAGAAGACTAAACACCCACAACTACTGTATGAGGCCAAGTTATATAATGCCCTTCAAGGAGGAAGTGGTGTTCCAAGTATGAAATGGTATGGTATTGACGGAGACAATAACGTTATAGTCATGGATCTTTTGGGACCAAGTCTCGAGGATCTTTTTGTATACTGTGGGGGGAAGTTTTCATTAAAAACAGTTTTGATGCTGGCCGATCAGATGCTTGGAAGGATAGAGTATTTACATTCTAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTAGGGAGAAAAGCAAATCAGGTTTATATGATTGATTTTGGGCTTGCAAAAAGATACAAGGATCCTACAACCAATAAGCATATTTCTTATAGAGAGAACAAAAATTTAACAGGCACTGCCCGGTATGCGAGTTGCAATACTCATTTGGGAATTGAGCAAAGTAGACGGGATGATTTGGAGTCTCTTGGTTATGTTCTTCTTTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAGAGCTGCCACTAAAAAGCAGAAATATGACAAGATCTGTGAGAAGAAGTTATCCACTTCAATCGAGATCCTTTGCAAGTCTTATCCTGCGGAGTTTGCTTCTTACTTCCATTATTGCCACTCTTTGACATTTGATCAACGCCCAGATTATGGATTCTTGAAGCGCCTGTTTCGAGATTTATTTACTCGCGAAGGATACGAGTCTGACTACATATATGACTGGACCATTCTTAAATATCAGCAATCACAACAGACAAAGATGAAGGATCAATCAACTCCTGCTGCTGATGTGCCTGGCCGTGTAGAACCAAATATGGTAGATAAGAATAAAGGTGTCAACGATTCTGCTCAAATTGCAGAGGCAAGACCATTAACAAATGTTAATGCACGTGTTAATATGCAGATCAGGTCATCACATGATGATCATAATCCGAATGCAGAGAATCAGATTGTGAAACGTCCCGTGAGAATTGGTCCGTCTACATCCGTGAAACCCGGAATCGCAGAAAATGTGCCAAAAGCAGAGAAACCAATAGGAAGCTCAAACCTGGGACGTGTATTTGGGCATAACACTGCCACTTCAAGCAGCTGGATTCCTTCACTACGCAGAATTTCTTCAGCCAAAAAATAG 1278 0.4155 MERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAVKMESKKTKHPQLLYEAKLYNALQGGSGVPSMKWYGIDGDNNVIVMDLLGPSLEDLFVYCGGKFSLKTVLMLADQMLGRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYKDPTTNKHISYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYDKICEKKLSTSIEILCKSYPAEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREGYESDYIYDWTILKYQQSQQTKMKDQSTPAADVPGRVEPNMVDKNKGVNDSAQIAEARPLTNVNARVNMQIRSSHDDHNPNAENQIVKRPVRIGPSTSVKPGIAENVPKAEKPIGSSNLGRVFGHNTATSSSWIPSLRRISSAKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2399 425 PANTHER CASEIN KINASE-RELATED 13 329 - -
Alju07g2399 425 MobiDBLite consensus disorder prediction 373 412 - -
Alju07g2399 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Alju07g2399 425 FunFam Casein kinase I isoform delta-like 1 339 - -
Alju07g2399 425 MobiDBLite consensus disorder prediction 306 325 - -
Alju07g2399 425 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2399 425 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2399 425 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Alju07g2399 425 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2399 425 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Alju07g2399 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2399 Alju-ChrAlju07 49710516 49715871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2399 8 213 EF-hand Containing Proteins AT2G17890 28.837 8.85e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Alju07g2399 Pkinase 4e-28 CL0016